Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1209 ATGTCAATCTTGTCCATTCCGTCGCCGATATATGGTTCTACTCATTCCTCCCTCTCAATTTCTCGGCTGCCGTCTTCTTTAACGGCTCAGCCACTGCAAGTGAGAAGAAGAGCAAAAGGGAAAGGTGTGGTGGTAATGAGTATGGAGGCAGGTATCGGAGTCATGGCCACCAAATTGGGTATGATGAGCTTCTTCCAACCCGACGGTGTGGTCGTTCCTGTCACTGTCGTTGGCTTCAAAGAAGGGAACATTGTCACACAGATCAAAACTGAGGCTACCGATGGCTACAGCGCCGTCCAGGTTGGTTACCGAAGGATCAGAGACCGCAAATTGACCAAACCCGAAATGGGTCATCTCGAGAAGGTTGGTGCCATTCCCATGCGTCATCTTCAGGAGTTCCGTCTTCAAACCGTTGATCAATTCGACCTTAACCAACGCCTCATTTTCGATGAACTTTTCAAGGAGGGTGATCTTGTTGATGTCTCTGGCACCACCATTGGCAAGGGTTTCCAAGGTGGAATCAAGCGTCACCACTTCAAAAGGGGTCCAATGAGCCATGGTTCGAAGAGTCATAGACAACTGGGATCAATTGGTGCTGGAACCACACCCGGTCGTGTGTACAAGGGAAAGAAGATGCCCGGAAGGATGGGAGGAACCAAGAGGAAGATAAGAAAGCTTAAGATTGTCAAAATTGATAAAGATCTTAACGTGGTAATGATCAAAGGTGCTCTCCCTGGTAAGCCTGGAAATCTTCTACGGATAACTCCAGCCAAGATTGTGGGCGAGAACATCCCAAAGAATTAG 804 0.4826 MSILSIPSPIYGSTHSSLSISRLPSSLTAQPLQVRRRAKGKGVVVMSMEAGIGVMATKLGMMSFFQPDGVVVPVTVVGFKEGNIVTQIKTEATDGYSAVQVGYRRIRDRKLTKPEMGHLEKVGAIPMRHLQEFRLQTVDQFDLNQRLIFDELFKEGDLVDVSGTTIGKGFQGGIKRHHFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDKDLNVVMIKGALPGKPGNLLRITPAKIVGENIPKN* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1209 267 MobiDBLite consensus disorder prediction 179 219 - -
Pvu9g1209 267 TIGRFAM L3_bact: 50S ribosomal protein uL3 53 254 IPR019927 GO:0003735|GO:0005840|GO:0006412
Pvu9g1209 267 Hamap 50S ribosomal protein L3 [rplC]. 51 258 IPR019927 GO:0003735|GO:0005840|GO:0006412
Pvu9g1209 267 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 46 266 - -
Pvu9g1209 267 Pfam Ribosomal protein L3 145 233 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pvu9g1209 267 PANTHER 50S RIBOSOMAL PROTEIN L3 46 266 IPR019927 GO:0003735|GO:0005840|GO:0006412
Pvu9g1209 267 SUPERFAMILY Translation proteins 52 263 IPR009000 -
Pvu9g1209 267 Gene3D - 84 143 - -
Pvu9g1209 267 ProSitePatterns Ribosomal protein L3 signature. 153 176 IPR019926 -
Pvu9g1209 267 Gene3D Translation factors 179 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1209 Pvu-Chr9 17560293 17561777 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1209 K02906 - gmx:100802392 432.565