Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1207 ATGAAGAACACAACTTGTACTTCTATTTCAGTAACCAACGAACCATCTTCATCACCTCCATCCTCTGCTATTCTTCTCTTTCACAAACACAATGACAATGGAGAACAAACCCTCGTGCCTCCCAACCCCAACCCCAACCTCGGCGACGGCTTCTATGAAATCGAAACCATACGCCGTAAGAGGGTACGCAAGGGTCAGCTCCAGTACCTAATAAAATGGCGTGGATGGCCTGAGACTGCCAACACCTGGGAGCCTCTTGAAAATCTACAGTCCGTTCCTGATCTTCTTCACGCTTTTGAGGACAGTCTCAAGTCAGGAACAGTTCGCAAGCGCAAGCGCAAGGATGTCGTTCATCACACCAAGGTCAAGAATCACCCCCAACGTTGTACCACTTCTTACAGCCTTAGACATTTTCCAACTCACAATCCCCATTCTCAAACTCCCATCTTCCCTCACCAACCTCATCCTACCACCCTTCCTCAACCCCAACCAACCAATGTAAATGCCTTTCCAGAACACCACCAAAATGATTATGATCCAAAGCTCAGTGAACTTAAGGCAACAACAAACACTGCCCTTGAGCTAGATAACCTTGGAATGCATTTCCGGCAACCTAAGGTTTCAAGTGCCAATGGTGGTCACCTGGATTGCGCGGAACCAACTCAAACTGGGTGCTGTAGAGGAGCAAAAAGGAGAAAATCTGGTTCTGTCAAGAGCTTCAAGAGAGAGACAGATGCAGGGAAGCCTGTTGATGCTCAGAATGCAGTCAGCTTGCCTGTTGGTGCAGTTGAACCAGGCTGCACGAGAACCGCTGGTTGTGTGGGGAATGATAGTCCTGTGAAGATGGATGATGCTAAAAGTGCCTGCAATATTGTCAAGATTTTGAAGCCAATAGGTTATTCATCTTCTTTATCCGACAATATGCAGGATGTTTTAGTGACATTTATGGCCATGAGGTCTGATGGAACAGAAGTGATGGTGAATAACAGATATCTCAAGGCATACAATCCACTTCTGCTGATTAATTTCTATGAGTTGCATCTCCGGTATAGTCCTACATTGTAA 1065 0.461 MKNTTCTSISVTNEPSSSPPSSAILLFHKHNDNGEQTLVPPNPNPNLGDGFYEIETIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSVPDLLHAFEDSLKSGTVRKRKRKDVVHHTKVKNHPQRCTTSYSLRHFPTHNPHSQTPIFPHQPHPTTLPQPQPTNVNAFPEHHQNDYDPKLSELKATTNTALELDNLGMHFRQPKVSSANGGHLDCAEPTQTGCCRGAKRRKSGSVKSFKRETDAGKPVDAQNAVSLPVGAVEPGCTRTAGCVGNDSPVKMDDAKSACNIVKILKPIGYSSSLSDNMQDVLVTFMAMRSDGTEVMVNNRYLKAYNPLLLINFYELHLRYSPTL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1207 354 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 30 353 IPR044251 GO:0006325|GO:0031507
Pvu9g1207 354 MobiDBLite consensus disorder prediction 1 20 - -
Pvu9g1207 354 ProSiteProfiles Chromo and chromo shadow domain profile. 52 111 IPR000953 -
Pvu9g1207 354 ProSitePatterns Chromo domain signature. 69 89 IPR023779 -
Pvu9g1207 354 Gene3D - 28 104 - -
Pvu9g1207 354 PRINTS Chromodomain signature 49 57 IPR017984 -
Pvu9g1207 354 PRINTS Chromodomain signature 62 76 IPR017984 -
Pvu9g1207 354 PRINTS Chromodomain signature 77 89 IPR017984 -
Pvu9g1207 354 SMART ChS_2 280 353 IPR008251 GO:0005634
Pvu9g1207 354 CDD CD_CSD 52 101 - -
Pvu9g1207 354 Pfam Chromo (CHRromatin Organisation MOdifier) domain 52 101 IPR023780 -
Pvu9g1207 354 SUPERFAMILY Chromo domain-like 33 106 IPR016197 -
Pvu9g1207 354 SMART chromo_7 51 104 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1207 Pvu-Chr9 17541857 17548419 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1207 - - vun:114164029 588.186