Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1199 ATGAAGAAGAATAGGATGATGATTATGATATGGAGCGTAGGAGTAGTGTGGATGCTGTTAGTTGGAGGAAGCTACGGAGTGCAGTGTGGAACGGAAGCAGGAGGTGCACTGTGCCCACGGGGTCTCTGTTGCAGCCAGTGGGGGTGGTGCGGCTCCACCATCGACTACTGCGGCCCGGGTTGCCAGAGCCAGTGCGGGGGACAGCCGTCTACTCCTCCTCCTCCTCCTCCTACTCCTACCCCTAGTCCTCCTCCTCCTACCCCTACTCCTCCTAGTCCTCCTACTGATCTTAGCGCCCTCATTCCCGAGTCCACCTTCGAACAAATGCTCAAACATCGCAACAACGCAGCCTGCCCAGCCAGAGGCTTCTACACCTACGATGCCTTCATCGCCGCCGCCAAGTCTTATCCCAGCTTCGGCAACACCGGAGACACGGCCACTCGCAAGAGGGAGATTGCGGCCTTCTTGGGGCAAACGTCTCACGAAACAACCGGAGGATGGGCCACTGCGCCGGACGGACCATTCGCATGGGGATACTGCTTCGTGAGGGAGGTGAACCCCGGTACGTACTGCTCCGCCACTCCCCAGTTCCCCTGCGCCCCTGGGCAGCAGTACTACGGCAGGGGTCCCATCCAGTTATCCTGGAACTACAACTACGCTCAGTGCGGAAGGGCCATTGGGGTTGACTTGATCAACAACCCTGATCTAGTCGCCACTGACCGTCTCATCTCCTTCAAGTCCGCCCTCTGGTTCTGGATGACCGCACAGTCCCCCAAGCCTTCCTCCCACGACGTCATCACCTCTCGATGGACCCCCTCCCCTGCCGACGTCGCCGCCCGCAGGCTTCCCGGCTACGGCACTGTGACGAACATCATCAACGGAGGCCTGGAGTGCGGGCGAGGACAGGACAGCAGGGTTGAAAACCGCATCGGATTCTTCAAGAGATACTGTGATATGCTTGGAATTGGTTATGGCAACAACCTTGACTGCAACTCACAGACTCCATTTGGAAATTCACTCTTACTCTCTGACCTTGTCACCTCTCAGTGA 1050 0.58 MKKNRMMIMIWSVGVVWMLLVGGSYGVQCGTEAGGALCPRGLCCSQWGWCGSTIDYCGPGCQSQCGGQPSTPPPPPPTPTPSPPPPTPTPPSPPTDLSALIPESTFEQMLKHRNNAACPARGFYTYDAFIAAAKSYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPFAWGYCFVREVNPGTYCSATPQFPCAPGQQYYGRGPIQLSWNYNYAQCGRAIGVDLINNPDLVATDRLISFKSALWFWMTAQSPKPSSHDVITSRWTPSPADVAARRLPGYGTVTNIINGGLECGRGQDSRVENRIGFFKRYCDMLGIGYGNNLDCNSQTPFGNSLLLSDLVTSQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1199 349 PIRSF Endochitinase 1 337 IPR016283 GO:0004568|GO:0005975
Pvu9g1199 349 Gene3D Endochitinase, domain 2 183 239 - -
Pvu9g1199 349 PANTHER CHITINASE-RELATED 8 336 - -
Pvu9g1199 349 SMART ChitinBD_3 28 65 IPR001002 GO:0008061
Pvu9g1199 349 Gene3D - 100 331 - -
Pvu9g1199 349 SUPERFAMILY Plant lectins/antimicrobial peptides 28 76 IPR036861 GO:0008061
Pvu9g1199 349 Pfam Chitin recognition protein 28 65 IPR001002 GO:0008061
Pvu9g1199 349 PANTHER CHITINASE (CLASS IB) / HEVEIN 8 336 - -
Pvu9g1199 349 CDD chitinase_GH19 101 330 - -
Pvu9g1199 349 SUPERFAMILY Lysozyme-like 97 337 IPR023346 -
Pvu9g1199 349 ProSiteProfiles Chitin-binding type-1 domain profile. 26 67 IPR001002 GO:0008061
Pvu9g1199 349 MobiDBLite consensus disorder prediction 68 97 - -
Pvu9g1199 349 Pfam Chitinase class I 101 330 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu9g1199 349 Gene3D - 27 67 IPR036861 GO:0008061
Pvu9g1199 349 PRINTS Chitin-binding domain signature 36 44 IPR001002 GO:0008061
Pvu9g1199 349 PRINTS Chitin-binding domain signature 44 51 IPR001002 GO:0008061
Pvu9g1199 349 PRINTS Chitin-binding domain signature 51 58 IPR001002 GO:0008061
Pvu9g1199 349 ProSitePatterns Chitin recognition or binding domain signature. 38 57 IPR018371 GO:0008061
Pvu9g1199 349 ProSitePatterns Chitinases family 19 signature 2. 243 253 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu9g1199 349 CDD ChtBD1_GH19_hevein 27 66 - -
Pvu9g1199 349 MobiDBLite consensus disorder prediction 65 98 - -
Pvu9g1199 349 ProSitePatterns Chitinases family 19 signature 1. 118 140 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1199 Pvu-Chr9 17485614 17486785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1199 28 345 Glycoside Hydrolase AT3G12500 65.000 4.08e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1199 K20547 - egr:104419011 483.026