Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1197 GAGCGGAACCCCAGCACGTACTGCTCCGCCACTCCCCAGTTCCCCTGCGCCCCTGGGCAGCAGTACTACGGCAGGGGTCCCATCCAGATATCCTGGAACTACAACTACGGTCAGTGCGGAAGGGCCATTGGGGTTGACTTGCTCAACAAACCTGATCTAGTCGCCACTGACTCTGTCATCTCCTTCAAGTCCGCCCTCTGGTTCTGGATGACCGCACAGTCCCCCAAGCCTTCCTCCCACGACGTCATCACCTCTCGATGGACCCCCTCCTCTGCCGACGTCGCCGCCCGCCGGCTTCCCGGCTACGGCACTGTGACGAACATCATCAACGGAGGCCTGGAGTGCGGGCGAGGACAGGACAGCAGGGTTCAAGACCGCATCGGATTCTTCAAGAGATACTGTGATCTGCTTGGAGTCGGTTATGGCAACAACCTTGACTGCTACTCTCAGACTCCATTTGGAAATTCACTCTTACTCTCTGACCTTGTCACCTCTCAGTGA 501 0.5808 ERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTSQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1197 166 CDD chitinase_GH19 1 147 - -
Pvu9g1197 166 Pfam Chitinase class I 3 147 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu9g1197 166 PANTHER ENDOCHITINASE 1 3 158 - -
Pvu9g1197 166 SUPERFAMILY Lysozyme-like 4 154 IPR023346 -
Pvu9g1197 166 ProSitePatterns Chitinases family 19 signature 2. 60 70 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu9g1197 166 PANTHER CHITINASE-RELATED 3 158 - -
Pvu9g1197 166 Gene3D - 28 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1197 Pvu-Chr9 17433812 17434313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1197 1 162 Glycoside Hydrolase AT3G12500 68.098 4.87e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1197 K20547 - egr:104419011 284.263