Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1194 ATGAGCCAGTGCGGGGTACAGCCGTTTCCTACTCCTCCTCCTCCTCCTACCCCTACTCCTCCTCCTACTGGTCTCAGCGCCCTCATACCCAAGGACACCTTCGAAGAAATGCTCAAACATCGCAACAACCCAGCCTGCCCAGGCAGAGGCTTCTACACCTACGAGGCCTTCATCGCCGCCGCCAAGTCTTACCCCAGGTTCGGCAACATCGGAGACACGGCCACTCGCAAGAGAGAGATTGCGGCCTTCTTAGCGCAAACGTCTCACGAAACAACCGGGGGATGGCCCACTGCGCCAGACGGACCATACGCATGGGGATACTGCTTCCTGAGGGAGGTGAACCAGGGTACGTACTGCTCCGCCACTCCCCAGTTCCCCTGCGCCCCTGGGCAGCAGTACTACGGCAGGGGTCCCATCCAGTTATCCTGGAACTACAACTACGCTCAGTGCGGAAGTGCCATTGGGCTTGACTTGATCAACAACCCTGATCTAGTCGCCACTGACCGTCTCATCTCCTTCAAGGCCGCCCTCTGGTTCTGGATGACCCCACAGTCCCCCAAGCCTTCCTGCCACAACGTCATCACCTCTCGATGGATCCCCTCCCTTGCCGACGTCGCCGCCCGCAGGCTTCCCGGCTACGGCACTGTGACGAACATCATCAACGGAGGCCTGGAGTGCGGACGAGGACAGGACAGCAGGGTTGAAAACCGCATCGGATTCTTCAAGAGATACTGTGATATGCTTGGAATTGGTTATGGCAACAACCTTGACTGCAACTCACAGACTCCATTTGGAAATTCACTCTCACTCTCTGACCAGTGA 822 0.5766 MSQCGVQPFPTPPPPPTPTPPPTGLSALIPKDTFEEMLKHRNNPACPGRGFYTYEAFIAAAKSYPRFGNIGDTATRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREVNQGTYCSATPQFPCAPGQQYYGRGPIQLSWNYNYAQCGSAIGLDLINNPDLVATDRLISFKAALWFWMTPQSPKPSCHNVITSRWIPSLADVAARRLPGYGTVTNIINGGLECGRGQDSRVENRIGFFKRYCDMLGIGYGNNLDCNSQTPFGNSLSLSDQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1194 273 PANTHER CHITINASE (CLASS IB) / HEVEIN 2 264 - -
Pvu9g1194 273 PIRSF Endochitinase 2 265 IPR016283 GO:0004568|GO:0005975
Pvu9g1194 273 PANTHER CHITINASE-RELATED 2 264 - -
Pvu9g1194 273 ProSitePatterns Chitinases family 19 signature 1. 46 68 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu9g1194 273 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g1194 273 SUPERFAMILY Lysozyme-like 25 265 IPR023346 -
Pvu9g1194 273 Gene3D - 28 259 - -
Pvu9g1194 273 CDD chitinase_GH19 29 258 - -
Pvu9g1194 273 Gene3D Endochitinase, domain 2 111 167 - -
Pvu9g1194 273 ProSitePatterns Chitinases family 19 signature 2. 171 181 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pvu9g1194 273 MobiDBLite consensus disorder prediction 7 24 - -
Pvu9g1194 273 Pfam Chitinase class I 29 258 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1194 Pvu-Chr9 17415736 17416557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1194 25 268 Glycoside Hydrolase AT3G12500 67.347 6.01e-124 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1194 K20547 - egr:104419011 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1194 9 17415736 17416557 Pvu9g1194 9 17415736 17416557 ECH