Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1184 ATGGATTCCGGCGGCAATTCTTTACCGTCTGCACCTGATGCGGTTAAGAGAAAGGTTTGCTATTTCTATGATCCAGAGGTTGGGAATTACTATTATGGTCAAGGTCACCCTATGAAGCCACATCGTATACGGATGACACATGCTCTTCTTGCTCATTATGGATTGCTTCAGCACATGCAGGTCCATAAGCCATTTCCTGCTAGAGATCGGGATCTTTGTCGTTTTCACGCTGATGATTATGTTGCATTCCTTCGAAGCATAACTCCTGAAACACAGCAGGATCATCTGAGGCAACTCAAACGCTTTAATGTTGGTGAAGATTGTCCTGTTTTTGATGGCCTCTACTCTTTCTGTCAAACTTATGCAGGGGGGTCAGTTGGGGGTGCTGTCAAGTTAAATCATGACCAATGTGATATTGCTGTCAACTGGGCTGGTGGGTTGCATCATGCCAAGAAGTGTGAGGCTTCTGGATTTTGCTATGTTAATGATATAGTCCTCGCAATCTTAGAACTTCTTAAACAACATGAGCGTGTTCTGTACGTGGATATTGATATCCACCATGGAGATGGTGTGGAGGAAGCATTCTATACTACTGACAGAGTCATGACTGTTTCTTTTCATAAATTCGGAGACTATTTTCCTGGTACTGGGGATGTACGTGATATTGGATATGGAAAAGGAAAATACTACTCTCTTAATGTTCCACTTGATGATGGCATTGATGATGAGAGTTATCATTTCTTGTTCAAACCATTAATTGGCAAAGTAATGGAAGTGTTCAGACCTGGTGCAGTAGTTCTCCAATGCGGTGCTGATTCTCTATCTGGAGACCGATTGGGATGTTTCAATCTTTCAATTAGGGGACATGCAGAGTGTGTCAAATACATGAGATCATTCAACGTGCCCCTCTTGCTACTAGGTGGTGGTGGCTACACCATTCGGAATGTTGCTCGATGTTGGTGCTATGAGACAGGAGTTGCTCTTGGAATAGAAGTTGATGACAAAATGCCAGAACATGAGTATTATGAATATTTTGGTCCAGATTATACCCTCCATGTTGCCCCAAGTAACATGGAAAACAAGAATTCCCGTTATTTACTTGAAGAAATTCAATCTAAGCTACTTGAGAATCTTTCCAAGCTGCAGCATGCTCCTAGTGTCCAATTTCAGGAAAGGCCTCCGGATTCTGATCTTGGAGAGGCAGATGAAGATCATGACAATGGAGATGAGACATGGGATCCAGATTCAGACATGGACGTTGATGTTGAACGTGGGCTTGTACCAAGCAGAGTAAAGAAAGAAATAGTTGAACCGCAACTCAATGATCCGGATGACCAAAGAAGAAGTGGGGAGCATTTGAGAGACTCTGATACTGCAGTTGCTGAAACTTGTATGAAGGCTCTAGATATTTCTTCTCAGAAAGCTGATGAAGATAATGTGAAAGTTGAACACAATACTGTGAATGATTTGACCAAAGAGACGGGCCTAAAGTGCTAA 1497 0.4242 MDSGGNSLPSAPDAVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHFLFKPLIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPEHEYYEYFGPDYTLHVAPSNMENKNSRYLLEEIQSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDNGDETWDPDSDMDVDVERGLVPSRVKKEIVEPQLNDPDDQRRSGEHLRDSDTAVAETCMKALDISSQKADEDNVKVEHNTVNDLTKETGLKC* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1184 498 MobiDBLite consensus disorder prediction 384 458 - -
Pvu9g1184 498 PANTHER HISTONE DEACETYLASE 3 491 - -
Pvu9g1184 498 Pfam Histone deacetylase domain 36 324 IPR023801 -
Pvu9g1184 498 PIRSF HDAC_I_euk 4 491 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 Gene3D Histone deacetylase domain 15 388 IPR037138 -
Pvu9g1184 498 MobiDBLite consensus disorder prediction 400 417 - -
Pvu9g1184 498 PANTHER HISTONE DEACETYLASE 19 3 491 - -
Pvu9g1184 498 PRINTS Histone deacetylase superfamily signature 145 168 IPR000286 -
Pvu9g1184 498 PRINTS Histone deacetylase superfamily signature 177 192 IPR000286 -
Pvu9g1184 498 PRINTS Histone deacetylase superfamily signature 262 272 IPR000286 -
Pvu9g1184 498 PRINTS Histone deacetylase signature 38 55 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 PRINTS Histone deacetylase signature 71 89 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 PRINTS Histone deacetylase signature 102 119 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 PRINTS Histone deacetylase signature 123 143 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 PRINTS Histone deacetylase signature 164 180 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 PRINTS Histone deacetylase signature 223 236 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 PRINTS Histone deacetylase signature 240 258 IPR003084 GO:0004407|GO:0016575
Pvu9g1184 498 MobiDBLite consensus disorder prediction 418 458 - -
Pvu9g1184 498 SUPERFAMILY Arginase/deacetylase 17 381 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1184 Pvu-Chr9 17283966 17295362 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1184 K06067 - gmx:100795375 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1184 9 17283966 17295362 Pvu9g1184 9 17283966 17295362 ECH