Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1182 ATGTACGTCGTGAAGAGGGACGGACGCCAAGAAACGGTGCACTTCGACAAAATAACTGCGCGCCTCAAGAAACTCAGTTATGGCTTGAGCACCGTTCACTGCGACCCCGTTCTCGTCGCTCAGAAAGTCTGCGCCGGCGTCTACAAAGGCGTCACTACCAGTCAACTCGACGAATTGGCCGCCGAAACAGCCGCCGCTATGACCGCAAACCATCCCGATTACGCTAGTTTGGCTGCTAGGATTGCCGTTTCGAATCTCCACAAGAAAACCAAAAAGTCGTTCTCGGAGACGATCAAAATCATGTACTATCATTTTAACGAGAAATCTGGGTTGAAGGCTCCTCTGATCGCTGATGATGTTTATGAAGTAATTATGAAGAATGCTTCTCGTTTGGACAGCGAGATAATTTATGACAGGGACTTTGACTATGATTATTTTGGGTTCAAAACCCTCGAGAGGTCTTACCTCTTGAAGGTTCAAGGGCAGGTTGTTGAAAGGCCCCAACACATGTTGATGAGAGTCGCGGTTGGGATTCACAAGGATGACATAGAATCTGCTGTCAGAACTTACCACATGATGTCTCAACGATGGTTCACCCATGCATCTCCAACACTTTTCAATGCTGGAACTCCTAGGCCTCAACTGAGTAGCTGCTTCCTCGTGTGCATGAATGATGATAGCATAGAGGGGATATATGAAACTTTGAAGGAGTGTGCCATCATTAGCAAATCAGCTGGAGGAATAGGTGTCTCTGTCCACAACATTCGTGCTACGGGTAGTTATATTCGTGGGACAAATGGGACGTCCAACGGTATTGTTCCAATGTTACGTGTGTTCAATGATACTGCCCGCTATGTTGATCAGGGGGGAGGCAAGAGGAAAGGAGCATTTGCTGTGTACTTGGAGCCATGGCACGCTGATATGTTTGAGTTCTTGGATTTAAGAAAAAATCAAGGGAAGGAGGAGCATCGTGCACGAGATCTGTTTTACGCTCTTTGGGTGCCTGATCTCTTTATGGAAAGAGTTCAGAGTAATGGACAATGGTCTTTGTTTTGCCCCAATGAAGCACCGGGTTTGGCAGATTGTTGGGGTGAGGAATTTGAGGAACTTTACCATCGATATGAAAGAGAAGGGAAAGCAAAGAAGGTTGTCCAGGCTCAGAGCCTCTGGTTTGAAATTCTGAAATCACAGATAGAAACCGGAACCCCTTACATGCTTTTTAAGGATACTTGCAATAAGAAAAGCAACCAACAGAATTTGGGAACAATTAAATCGTCTAACTTGTGTACTGAGATAATTGAGTATTCAAGTCCAACTGAAACTGCTGTGTGCAATCTGGCATCCATTGCACTACCACGATATGTAAGAGAGAAGGGTGTCTCAGTGGAGTCTCATCCATCTAAGCTTGTTGGAAGCACAGGCTCTGGGAATCGGTTTTTTGACTTTGATATGCTAGCCGAGATTACTGCGCTGGTCACAACAAACCTGAACAAAGTGATTGATGTTAATTACTACCCAATTGAAAATGCAAAACGGTCAAACTTACGGCACAGACCCATTGGTATTGGAGTACAGGGTCTTGCTGATACTTTCATACTGCTTGGTATGGCATTTGATTCACCAGAGGCTCAGCAATTGAACAAAGAGATATTTGAGACTATTTACTATCATGCACTGAAAACTTCATGTGATTTGGCTGCAAAAGAAGGTCCCTATGAGACATATAGTGGTAGTCCTGTAAGCAAGGGAGTTCTCCAGCCAGACATGTGGGGTGTGACGCCCTCAAAACGTTGGGATTGGGTTGCACTTAGGGAGATGATATCGGAGAATGGTGTGAGAAATTCACTTCTCGTGGCTCCTATGCCTACTGCATCCACTAGCCAGATTCTTGGAAATAATGAGTGCTTTGAACCATATACTTCAAATATCTACAGTCGTAGAGTTTTAAGTGGTGAGTTTGTTGTTGTCAACAAGCATCTTCTTTATGATCTGACTGAAATGGGACTGTGGTCTCCTACATTGAAGAATAATATTATCTATGAAGATGGCTCTGTTCAGAAAATTCCAGAAATACCTCATGAACTGAAGACTATATACAAAACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGTTGATCGAGGTTGCTACATAGATCAGAGCCAAAGCTTAAATATTCACATTGATCAACCCAACTTCGGAAAGCTGACTTCTTTGCATTTCTATGCATGGTCCAAGGGTCTAAAGACAGGAATGTACTATCTTCGATCACGAGCTGCAGCAGATGCTATCAAGTTCACCGTGGACACCTCTGTTCTCAAAGAAAAGTCTAATGAAATGCAAGAAAAGGACAATGTGGAGTGTGATGATAATACAAAAATGGCACAAATGTTGTGCTCTTTAACCAACCGTGAAGAATGCCTAGCTTGTGGGAGTTGA 2448 0.4367 MYVVKRDGRQETVHFDKITARLKKLSYGLSTVHCDPVLVAQKVCAGVYKGVTTSQLDELAAETAAAMTANHPDYASLAARIAVSNLHKKTKKSFSETIKIMYYHFNEKSGLKAPLIADDVYEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGQVVERPQHMLMRVAVGIHKDDIESAVRTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMNDDSIEGIYETLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADMFEFLDLRKNQGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPNEAPGLADCWGEEFEELYHRYEREGKAKKVVQAQSLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVSVESHPSKLVGSTGSGNRFFDFDMLAEITALVTTNLNKVIDVNYYPIENAKRSNLRHRPIGIGVQGLADTFILLGMAFDSPEAQQLNKEIFETIYYHALKTSCDLAAKEGPYETYSGSPVSKGVLQPDMWGVTPSKRWDWVALREMISENGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLYDLTEMGLWSPTLKNNIIYEDGSVQKIPEIPHELKTIYKTVWEIKQRTLVDMAVDRGCYIDQSQSLNIHIDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSVLKEKSNEMQEKDNVECDDNTKMAQMLCSLTNREECLACGS* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1182 815 ProSiteProfiles ATP-cone domain profile. 1 92 IPR005144 -
Pvu9g1182 815 Pfam Ribonucleotide reductase, all-alpha domain 142 212 IPR013509 GO:0004748|GO:0005524|GO:0006260
Pvu9g1182 815 SUPERFAMILY R1 subunit of ribonucleotide reductase, N-terminal domain 6 214 IPR008926 -
Pvu9g1182 815 PRINTS Ribonucleotide reductase large chain signature 293 312 IPR000788 GO:0006260
Pvu9g1182 815 PRINTS Ribonucleotide reductase large chain signature 423 434 IPR000788 GO:0006260
Pvu9g1182 815 PRINTS Ribonucleotide reductase large chain signature 480 503 IPR000788 GO:0006260
Pvu9g1182 815 PRINTS Ribonucleotide reductase large chain signature 518 540 IPR000788 GO:0006260
Pvu9g1182 815 PRINTS Ribonucleotide reductase large chain signature 546 569 IPR000788 GO:0006260
Pvu9g1182 815 PRINTS Ribonucleotide reductase large chain signature 611 638 IPR000788 GO:0006260
Pvu9g1182 815 CDD RNR_I 167 760 - -
Pvu9g1182 815 Pfam ATP cone domain 1 89 IPR005144 -
Pvu9g1182 815 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 815 - -
Pvu9g1182 815 ProSitePatterns Ribonucleotide reductase large subunit signature. 600 622 IPR000788 GO:0006260
Pvu9g1182 815 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN 1 815 IPR039718 -
Pvu9g1182 815 Gene3D - 74 768 - -
Pvu9g1182 815 SUPERFAMILY PFL-like glycyl radical enzymes 215 770 - -
Pvu9g1182 815 TIGRFAM NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 761 IPR013346 -
Pvu9g1182 815 Pfam Ribonucleotide reductase, barrel domain 216 757 IPR000788 GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1182 Pvu-Chr9 17261105 17265957 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1182 K10807 - gmx:100791639 1542.32