Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1180 ATGTGTAATCCCAAACCATCCTCATCATCCCCATTTCTGTGTCCCACAAAAGCCCACATCATAACTCCCGACCCCAAACTCAAAAATCACCCTCCCGTTCACGATCAACTTCAAGATGAACTTCACAGATGGCCAACTCCCAAGGAGGTGATAGGAGAAATGAAGGCCCTGGGGAAGGTATCAGGACCAACAGCAGTGACGGGGTTACTCTTATATTCAAGAGCCATGATCTCAATGGTGTTCCTAGGGTACCTTGGGGATATGGAGCTGGCGGGAGGGTCTCTGTCCATCGGCTTCGCCAACATCACAGGCTACTCCGTCATCTCAGGTCTTGCCATGGGAATGGAACCCATTTGCGGCCAAGCCTACGGCGCAAAGCAATTCAAAACGCTGGGCTTAACCCTCCAGAGAACCGTCCTCCTCCTCCTCTCCACCTCCATCCCCATCTCCCTCGCCTGGCTCAACATGAAGTCCATACTCTTATGGTGCGGCCAAGACCACCAGATATCCTCCACCGCACAAACCTTCATCCTCTTTTCCATCCCAGACCTCTTCCTCCTCTCCCTCCTCCACCCCCTCCGCATCTACCTCCGAACACAAAGCATCACATTGCCCCTAACCTACTGCTCCGCCCTCTCCCTCCTCCTCCACCTCCCCCTCAACTTCCTCCTAGTCGTCCACTTCAAAATGGGAGTCTCCGGCGTCGCCATAGCCATGGTCTGGACCAACCTCAACCTATTCCTCTTCCTCTCCTCCTTCGTCTACTTCTCCGGCGTCTACAAAGACTCCTGGGTGCCCCCCAGCTCCGACTGCCTCCGCGGCTGGTCCTCCCTACTTGCACTTGCGGTTCCCACGTGCGTCTCTGTGTGCCTCGAATGGTGGTGGTACGAACTCATGATAATCCTCTGCGGGCTTCTCCTCAACCCCAAAGCGACCATTGCTTCCATGGGAATCCTCATCCAAACCACCTCCCTCGTCTACGTCTTCCCCTCCTCCCTCAGCCTCGGCGTCTCCACCCGCGTCGGCAACGAGCTCGGTGCCAACCGCCCCGCCAGGGCCCGCATTTCCATGATAGTCTCACTCGCCTGTGCCGTCGCCCTCGGCCTCGCCGCAATTGTTTTCACCACCCTCATGCGACACCAATGGGGCAGGTTCTTCACTGCTGACACCGAAATTCTTGACCTCACCGCCTCCGTCCTCCCCATCGTCGGCCTCTGCGAGCTCGGCAACTGCCCGCAGACCACGGGCTGCGGCGTCCTCCGCGGCAGCGCCCGGCCCACCGTCGGAGCCAACATCAATCTGGCCTCGTTTTATCTGGTGGGCATGCCGGTCGCTGTTCTTCTCGGGTTCGTCGTGAAAATGGGCTTTCCCGGGCTCTGGCTTGGGTTGCTTGCGGCCCAAGCCTCTTGCGCTTCTCTCATGATATTCGTTCTCTGCACCACTGACTGGAACGCTCAAGTGCAGAGGGCCAATGATCTTACCACTGCTAATTCTGCTTCTCCCAAGTTACCCACCACTCTCCCACCACCAACCGCAACTCCACACTCTAACCATGTTTCTCTTCCAGACACTCTTGTCACCCATGATCACCTTCCCCACACACCCTCTCTTGAAACAGACCCTCTCATTATACACACCATAAATTAA 1647 0.5665 MCNPKPSSSSPFLCPTKAHIITPDPKLKNHPPVHDQLQDELHRWPTPKEVIGEMKALGKVSGPTAVTGLLLYSRAMISMVFLGYLGDMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQFKTLGLTLQRTVLLLLSTSIPISLAWLNMKSILLWCGQDHQISSTAQTFILFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSALSLLLHLPLNFLLVVHFKMGVSGVAIAMVWTNLNLFLFLSSFVYFSGVYKDSWVPPSSDCLRGWSSLLALAVPTCVSVCLEWWWYELMIILCGLLLNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPARARISMIVSLACAVALGLAAIVFTTLMRHQWGRFFTADTEILDLTASVLPIVGLCELGNCPQTTGCGVLRGSARPTVGANINLASFYLVGMPVAVLLGFVVKMGFPGLWLGLLAAQASCASLMIFVLCTTDWNAQVQRANDLTTANSASPKLPTTLPPPTATPHSNHVSLPDTLVTHDHLPHTPSLETDPLIIHTIN* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1180 548 TIGRFAM matE: MATE efflux family protein 75 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g1180 548 Pfam MatE 284 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g1180 548 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g1180 548 PANTHER PROTEIN DETOXIFICATION 32 507 - -
Pvu9g1180 548 PANTHER MULTIDRUG RESISTANCE PROTEIN 32 507 - -
Pvu9g1180 548 CDD MATE_eukaryotic 53 489 IPR045069 GO:0042910|GO:1990961
Pvu9g1180 548 MobiDBLite consensus disorder prediction 496 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1180 Pvu-Chr9 17207088 17209233 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1180 K03327 - gmx:100788339 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1180 9 17207088 17209233 Pvu9g1180 9 17207088 17209233 ECH