Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1167 ATGGCGTCTTCTAAGAGGCCAAATGCAGAGCCCAACGGGAAAGGGAAACGCCAAAAATCATCCGGTGGTTTTTCGTCGTTGGATGTTTCTCCAGGGAGTGCCGTGTTCCGTTTGCTGTGTCCCGTTTCAAGAATCGGCAGTGTTATTGGCAAAGGAGGTGCCATCATTTCACAAATTCGGCAAGAAACTGGTGTGAAGGTCAAGATTGAGGAAGCTATACCTGGGTGTGATGAAAGGGTTATCACTATCTCAGGTTCTGATAAAGAAACTGAAGGAGATCATGCAGAGCAGGTAAGGGAGGTTAACAATGATGACGCTGGAAACGAGGGGAAGGGGGATGAGAAGGATGGTGGTGATGGTGATGGTAATGAAGAGAAAGAAGATAAAAGTTCTGTTATCGTTGAAGATTCTCCTAGTGAGAAGGGGAATTCAGCCATTCGGAAGGCTATATCACTAGTTTTTGAGAGAATGGTTGAGGGAGTAGAGGAGACAAGTGAAGGGGACGAGGAAAGTAATAAATCTTCTTCCCTTGTTTTTAGGTTACTTATTCTTACTACTCAAGTTGGATGCCTTCTAGGAAAGGGTGGTAGTGTGATTAAGAGAATGGCAGCTGAGAGTGGGGCACATATTCGGATCCTTCCTAAAGACAAACTTCCAGCGTGTGCATCAGCTTCTGATGAGATAGTTCAGATCTCGGGAGGAGTAGATGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCACCAGCTATTGGAAAATCCGCCACGGGATCATGAATTGTCCACTAATTTTAATGGGCCTTCTCATTCATCTGGACAATTCCCATCACACAGCCGTTCTTTTGGTGGTCAAGGAGTACCTTTTGCTACTGCCCATGATATTTCTGTTTTTCATTCAGCCCCTCAATTGATTTCCAAGTTTCATGAAGGTGCCATTCACGGTCGCACGAGACCTCTACAGGAAATGCTTACTTTTTGTTTATTGTGTCCTGTGGAAAGGGTAGGAAATGTAATTGGTAAAGGTGGAACAATCATAAAGGCACTGCAGCAAGAGACCGTAAGTGAAATCAAGATTGTAGAAAGCCCTCCAGATTCAGAGGACTGTGTTATTGTTATATCTGGTCCAGCGCACCCAGATGATAGAGTATCCCCTGTGCAAGAGGCTGTATTTCGTGTGCAAACTAGAATAGCCAAGCCTATACCTGATGCCAAAGAACATACTATGTTAGCAAGGTTTCTTGTTTCTTCCAATCAAATAGGTTGTCTCCTCGGCAAGGGTGGTTCCATCATAACTGAAATGAGGAAGAAATCAGGGGCCCATATCCGTATATTAGGAAAGGATAAGGTTCCAAAGTGCGCTTCAGAGGACGAAGAAGTAATTCAGGTAAATGGAGAAATTGAGGCAGTGCATGATGCTCTTATGCAAATAACCACTAGATTAAAACATCATTTCTTTCGTGATTCACATCCATCTGTCAATTATCCTTCCAATCCTCTATTTATGGATCAACTTCCTCCATTCCCACCTTATTTAGGAAGGCGGGGACTATCACCTCCTGGGATGTATTCTGACCTGGGTCCTCCACCTCCTCATGCGGGTTTTCATCTTGATGACCACCCTCCCTTTTTGAATAATATACATAGACCAGGCATTCCTCCTCACATATCGGAAAGGAAGCCTTGGGGTTCTCAGGGGGTACTTGAAGGTGGCTCACGCATTGGCTTGCCAGACTATCCAGGAGGTCCTCCCAGAAGAATTTCAGGATTTGCAGGGGGGAGCCAACCAATTATCACAAGTACCACTGTTGAAGTTGTTGTTCCTCGAGCAATGGTGCCTGTAATATGTGGGGAAGATGGTGAATGCCTGAAACAAATACTTCAGATCTCTGATGCAAATATTACTATAACTGATCCAAAGCCTGGAGCTGTGGAAACTAAAATTATAATATCTGGAACCCCAGAGCAGACTCATGCAGCTCAAAGTCTTATTCAGGCATTTGTCATGAGTGAGAGGGAGTCTGGTTGA 2022 0.4436 MASSKRPNAEPNGKGKRQKSSGGFSSLDVSPGSAVFRLLCPVSRIGSVIGKGGAIISQIRQETGVKVKIEEAIPGCDERVITISGSDKETEGDHAEQVREVNNDDAGNEGKGDEKDGGDGDGNEEKEDKSSVIVEDSPSEKGNSAIRKAISLVFERMVEGVEETSEGDEESNKSSSLVFRLLILTTQVGCLLGKGGSVIKRMAAESGAHIRILPKDKLPACASASDEIVQISGGVDVVRKALQSVSHQLLENPPRDHELSTNFNGPSHSSGQFPSHSRSFGGQGVPFATAHDISVFHSAPQLISKFHEGAIHGRTRPLQEMLTFCLLCPVERVGNVIGKGGTIIKALQQETVSEIKIVESPPDSEDCVIVISGPAHPDDRVSPVQEAVFRVQTRIAKPIPDAKEHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALMQITTRLKHHFFRDSHPSVNYPSNPLFMDQLPPFPPYLGRRGLSPPGMYSDLGPPPPHAGFHLDDHPPFLNNIHRPGIPPHISERKPWGSQGVLEGGSRIGLPDYPGGPPRRISGFAGGSQPIITSTTVEVVVPRAMVPVICGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERESG* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1167 673 MobiDBLite consensus disorder prediction 80 143 - -
Pvu9g1167 673 CDD KH-I 600 663 - -
Pvu9g1167 673 ProSiteProfiles Type-1 KH domain profile. 33 99 - -
Pvu9g1167 673 CDD PCBP_like_KH 178 246 - -
Pvu9g1167 673 MobiDBLite consensus disorder prediction 249 279 - -
Pvu9g1167 673 CDD PCBP_like_KH 35 86 - -
Pvu9g1167 673 MobiDBLite consensus disorder prediction 249 281 - -
Pvu9g1167 673 MobiDBLite consensus disorder prediction 82 135 - -
Pvu9g1167 673 CDD PCBP_like_KH 410 476 - -
Pvu9g1167 673 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 30 87 IPR036612 GO:0003723
Pvu9g1167 673 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 320 406 IPR036612 GO:0003723
Pvu9g1167 673 Gene3D K Homology domain, type 1 597 670 IPR036612 GO:0003723
Pvu9g1167 673 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 3 534 - -
Pvu9g1167 673 ProSiteProfiles Type-1 KH domain profile. 321 388 - -
Pvu9g1167 673 Gene3D K Homology domain, type 1 33 100 IPR036612 GO:0003723
Pvu9g1167 673 Gene3D K Homology domain, type 1 404 482 IPR036612 GO:0003723
Pvu9g1167 673 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 598 667 IPR036612 GO:0003723
Pvu9g1167 673 Gene3D - 115 253 - -
Pvu9g1167 673 ProSiteProfiles Type-1 KH domain profile. 176 245 - -
Pvu9g1167 673 SMART kh_6 405 480 IPR004087 GO:0003676
Pvu9g1167 673 SMART kh_6 597 667 IPR004087 GO:0003676
Pvu9g1167 673 SMART kh_6 32 107 IPR004087 GO:0003676
Pvu9g1167 673 SMART kh_6 320 396 IPR004087 GO:0003676
Pvu9g1167 673 SMART kh_6 175 250 IPR004087 GO:0003676
Pvu9g1167 673 CDD PCBP_like_KH 323 392 - -
Pvu9g1167 673 ProSiteProfiles Type-1 KH domain profile. 598 662 - -
Pvu9g1167 673 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 3 534 - -
Pvu9g1167 673 Gene3D K Homology domain, type 1 320 398 IPR036612 GO:0003723
Pvu9g1167 673 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 402 484 IPR036612 GO:0003723
Pvu9g1167 673 Pfam KH domain 410 475 IPR004088 GO:0003723
Pvu9g1167 673 Pfam KH domain 180 245 IPR004088 GO:0003723
Pvu9g1167 673 Pfam KH domain 36 89 IPR004088 GO:0003723
Pvu9g1167 673 Pfam KH domain 600 663 IPR004088 GO:0003723
Pvu9g1167 673 Pfam KH domain 326 375 IPR004088 GO:0003723
Pvu9g1167 673 ProSiteProfiles Type-1 KH domain profile. 406 475 - -
Pvu9g1167 673 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 166 256 IPR036612 GO:0003723
Pvu9g1167 673 MobiDBLite consensus disorder prediction 14 28 - -
Pvu9g1167 673 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1167 Pvu-Chr9 17030673 17035421 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1167 K21444 - gmx:100777433 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1167 9 17030673 17035421 Pvu9g1167 9 17030673 17035421 ECH