Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1161 ATGGCCATTACTCCAAGTCTGAATGGTGCCCTCAGTTCGAGAATTTGTCCCCATATGACAGAGGTTGGATTTTTGAGGCTCAGTGAACGATGCAGCGTGTGTGTGTCTGTCCGAGTGTCTCTTTCCCCTGATGAGAAGATGGGGTTAACTCAAGTCTATGTCTCCTGCCACAACTATAGACAAACCTTCCTATGCCTCATTCTCTTTGCTATTCTATTCACGGCCAAAGCAAGAGTAATTTCTTCCAATCTTATACATGCTGCCCAGAAGGACATGAAAAAGCGGGAACCCATGATGGTGGCAAAATCTCAGATAGGGTCTAGGCCTCCCAAGTGTGAAAGAAGATGCAGTACTTGTGAGCACTGTGAAGCAGTTCAAGTCCCAGTTGTACCTCAAATTCAAACTCATAGAAGTCATTATTCATCAGCAAGAGCAACAACCATAGTTGTTTCTTACTCATCAAGAGGTGACGACCTTTCAAATTACAAACCAATGAGCTGGAAATGCAAGTGTGGGAACTACCTTTTCAATCCATGA 537 0.4395 MAITPSLNGALSSRICPHMTEVGFLRLSERCSVCVSVRVSLSPDEKMGLTQVYVSCHNYRQTFLCLILFAILFTAKARVISSNLIHAAQKDMKKREPMMVAKSQIGSRPPKCERRCSTCEHCEAVQVPVVPQIQTHRSHYSSARATTIVVSYSSRGDDLSNYKPMSWKCKCGNYLFNP* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1161 178 Pfam Epidermal patterning factor proteins 104 178 - -
Pvu9g1161 178 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 47 178 IPR039455 GO:0010374
Pvu9g1161 178 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2 47 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1161 Pvu-Chr9 16955395 16956625 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1161 - - pvu:PHAVU_009G113100g 350.903