Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1153 ATGGCGGTTTCCGATAGTCCAAGCGGTGCCTCCACGCCGCCTCAACAGGAACAAACCAACAAGTACGGTTTCACCAAGCCTCTCTCTCTTGCAGGTCCAACCGACGCTGATCTCCACCGTAACAACGATTTGGAGAAGTTATTACTCGATTCGGGGCTTTATGAGAGCAATGATGAGTCCGCCGCGAGGAAAGAGGTTCTTCACCGTCTCGATCAGATTGTGAAAAGCTGGGTGAAGCAGTTGACGCGCCAACGTGGCTACACAGATCAGATGGTCGAGGATGCAAACGCAGTCATTTTCACTTTTGGTTCTTACCGACTTGGGGTTCATGGACCTGGAGTTGACATTGACACTTTGTGCATTGGTCCTTCTTATGTGAACCGAGAGGAAGATTTCTTCATCCTTTTGCATAACATTCTGGCTGAAATGGAAGAAGTTTCTGAACTTCAACCTGTTCCTGATGCACATGTTCCTGTAATGAAATTCAAATTCCAGGGAATATCTATAGATTTGCTGTATGCAAGTATATCACTTTTGGTTGTGCCAGAAGACCTAGATATCTCGCATGGTTCAGTGCTGTATGATGTTGATGAACCAACCGTTCGAAGTCTTAATGGCTGTCGAGTGGCAGATCAAATTCTTAAACTTGTTCCAAATATTGAGCACTTCCGAACTACACTGAGATGCTTAAAGTTTTGGGCCAAAAGGCGTGGTGTTTATTCAAATGTTACTGGATTCCTTGGTGGTGTAAATTGGGCTATTTTAGTTGCTCGAATATGCCAGCTTTACCCTAATGCAATCCCTAGTATGTTGGTTTCCCGATTCTTCAGGGTTTATACCCAGTGGCGGTGGCCAAACCCTGTAATGCTATGCTCCATAGAAGAGAATGAACTGGGATTCCCTATATGGGATCCTCGTAGAAACCCCCGAGATAGATTCCACACTATGCCAATAATTACTCCTGCATACCCTTGCATGAATTCAAGCTACAATGTCTCGGCAAGCACTCTTCGTGTCATGATGGAACAGTTCCGCTATGGCAATAAGATTTGTGATGAAATTGACCTCAATAAAGCCCAGTGGAGTGCACTTTTTCAGCCTTACGTCTTTTTTGAGGCATACAAAAACTATTTACAAGTGGACATAGTTGCATCAGACACTGATGATTTACTAGCATGGAAGGGCTGGGTAGAATCTCGATTGAGGCTGCTTACCCTTAAGATAGAGCGAGATACAAATGGGATGCTGCAGTGCCATCCTTACCCACATGAGTATATAGACACATCAAAGCCTTGTGCACATTCTGCATTTTTTATGGGCTTGCAAAGGAAAGAAGGAGTAAGAGGTCAAGAGGGGCAGCAATTTGATATAAGAGGAACGGTTGATGAATTCAGACAAGAAATAAACATGTATATCTACTGGAAGCCTGGAATGGAAATTTTTGTTTCTCATGTTCGTCGAAAGCAGCTCCCTGCATTTGTTTTTCCTGATGGTTACAAACGCAGCAGAATGCCAAGGCATACAAGCCATCCAACTGAAAAAACAGGTGATGATGCCACAAAGTCCTACTCTGGGTCTGGGCCGTCTGAAAGATGCATCAAGAGGAAAAGTTACCCTGAAATGGTGGAAAAGAAGCCAGACAAACGGGCATCTATTAGCCCACAGAGGTTAGAATGTGTTTCTCCTGAAAGTTGTACTAATAAATCAGGTGGTACAGCTCAAATGAGTATTGATAGTATTGAAGGGGTTTGGTTAGCTGGTTCAACAACCAAGTCTGATAACAGCAATTGTGAAATTAAGTCATCTGACGTACTCCCAGGAAGTGGACTAAGCACCGAGGTAGCTGACATGCAGATTGGTGAACCAGGATTTGTTGACACCACACATGATATGTTGAAATCAAGGAGTGTAGAAGTTCCAAATGAGAATGGAGTTGTCAATGGGGACAAAGCTCAGGATCTGGCTTTAGATTGCTTGGAAAGTGAAGAAACCGAATCTACGAACAAGTTTTCACACTGTAAAGCGGGTGTCATTGATATGGATCAGCGACTAGACAAAGCATGTAATTTCATCACAAGGGATGAATGCTCAGATTATGTACCAAAGGCCAGCTCCCAGAACCTCAATTGCGAGCCAGATTTCAGACTCAGAAGTGTTGTAAAATTGAAGATGGGCTAG 2178 0.4366 MAVSDSPSGASTPPQQEQTNKYGFTKPLSLAGPTDADLHRNNDLEKLLLDSGLYESNDESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFILLHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIDLNKAQWSALFQPYVFFEAYKNYLQVDIVASDTDDLLAWKGWVESRLRLLTLKIERDTNGMLQCHPYPHEYIDTSKPCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYIYWKPGMEIFVSHVRRKQLPAFVFPDGYKRSRMPRHTSHPTEKTGDDATKSYSGSGPSERCIKRKSYPEMVEKKPDKRASISPQRLECVSPESCTNKSGGTAQMSIDSIEGVWLAGSTTKSDNSNCEIKSSDVLPGSGLSTEVADMQIGEPGFVDTTHDMLKSRSVEVPNENGVVNGDKAQDLALDCLESEETESTNKFSHCKAGVIDMDQRLDKACNFITRDECSDYVPKASSQNLNCEPDFRLRSVVKLKMG* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1153 725 Pfam Poly(A) polymerase predicted RNA binding domain 432 502 IPR007010 GO:0003723|GO:0043631
Pvu9g1153 725 Pfam Poly(A) polymerase predicted RNA binding domain 370 427 IPR007010 GO:0003723|GO:0043631
Pvu9g1153 725 MobiDBLite consensus disorder prediction 1 25 - -
Pvu9g1153 725 MobiDBLite consensus disorder prediction 500 517 - -
Pvu9g1153 725 CDD NT_PAP_TUTase 62 217 - -
Pvu9g1153 725 PANTHER NUCLEAR POLY(A) POLYMERASE 4 8 659 - -
Pvu9g1153 725 SUPERFAMILY PAP/OAS1 substrate-binding domain 218 367 - -
Pvu9g1153 725 Pfam Poly(A) polymerase central domain 23 366 IPR007012 GO:0004652|GO:0043631
Pvu9g1153 725 Gene3D Poly(A) polymerase predicted RNA binding domain 369 485 - -
Pvu9g1153 725 Pfam Nucleotidyltransferase domain 96 172 IPR002934 GO:0016779
Pvu9g1153 725 MobiDBLite consensus disorder prediction 533 552 - -
Pvu9g1153 725 MobiDBLite consensus disorder prediction 557 573 - -
Pvu9g1153 725 MobiDBLite consensus disorder prediction 1 27 - -
Pvu9g1153 725 MobiDBLite consensus disorder prediction 500 573 - -
Pvu9g1153 725 Gene3D - 23 365 - -
Pvu9g1153 725 Gene3D Beta Polymerase, domain 2 55 211 IPR043519 -
Pvu9g1153 725 SUPERFAMILY Nucleotidyltransferase 19 216 IPR043519 -
Pvu9g1153 725 PANTHER POLY A POLYMERASE 8 659 - -
Pvu9g1153 725 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 370 496 IPR011068 GO:0003723|GO:0016779|GO:0031123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1153 Pvu-Chr9 16816556 16822871 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1153 K14376 - gmx:100802620 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1153 9 16816556 16822871 Pvu9g1153 9 16816556 16822871 ECH