Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1144 ATGGATGACGATGAGAGAGAGAGGCTTCTGGAGAGGGAGAGATTGCAAATCCAGATGATACGCCAGCTCGATCTCGAGCACCTTGAAGTTGAAGAAGTCGATTACTCCGATGAAGACGAAGACGCCGACGTCGAGGTCGACGAGGAATATGCGATTTTTCTTTCACAATTAAATTCGTCTAGTTCTCCTCAATCTTCTGAATTCACTTTTGATACCTATGTCACGCCGTTGCATACGTATCTCGGCGATGTCGAAGACACGCGCCACAGGACTGCGTTATTGGACGGTGGAGCTGTATTGAACATTCCGCTCTTTTGTCTCCGAGGAGTTGTACTCTTTCCCGGGGCTACACTCCCCCTTAGAGTTATTGAACCTCGTTTGGTGGCTGCTGTGGAGAGAGCTCTAACTCAAGATGATATTCCTCATACCATTGGTGTGATTCGAATCCACAGGGACACTGCAACACGAAGGACGAAATCAGCAAGTGTTGGTACAACTGCAGAGATTCGACAATTTGGGCGTCTGGGGAATGGTTCACTGAATCTAGTTACCCGTGGACAACAACGGTTTCGCCTAAGACGGTTCTGGAATGACGTGGACGGAGTGCCTTATGGAGAGATCCAAATTATTGAGGAAGATCTGCCAGTGAGAATCCCAAGAGATGCTTTTGGCAAATTGGCACCATTGAGTAACATGCCCTGTAGCCAGGCTGTCTCGCATACAGTGTCTTCACCATATTCTCATGCTAAAATACATAGGTCAAAAATTGAGGAAAGTGATTCAGAACCAGATTCAGAAGAGAGTTTTGAGAATGAACTCTCATTGGTGGAAAGGAAAATCCATCTCTCAGTTGTTGGCTCCAGGTATGTGCATGATACAATGGATGAATCAGCAAACAGTAGCGACGCTAAATTCATGTGTAAGTCAGATCAGGAAATTAGATCTAATCTGGATTCAAGGACTGGGAACTGTTCCACTTCTGGAAAGCAGTCATGGAAAAATGAGCTTAATAGATGTAAACATATATGTGCCTACTCATCTCATAAAATTTCAAAAGCATTTTGGCCCCACTGGACATATAGGATGTTTGACTCTTATTTGCTGGCACAAAGGGCTGCAGATATGTGGAAGCAAATAGTTGGGGTGCCTAACATGGAAAGTCTCATTAAGAAGCCTGATGTTTTATCATTTCACATAGCTAGTAAAATACCTGTGTCTGAGTCTACACGGCAGGAGCTTTTGGATATTGATGGCATTGCATACAGACTGCGTAGAGAAATTGAATTACTGGAGAGCATTGATCTTATCCGGTGTAAAAGCTGTGAGACTACAATTGCAAAACGAAGTGATATGTTGGTGATGTCAAGTGAGGGTCCTCTTAGTGCATATGTGAATTCAAGTGGTTATGTGCATGAGATAATGACTTTCTACAAGGCAAATGGTTTATCTCTTATTGGACCAGCAGTATCTGAATACAGTTGGTTTCCTGGGTATGCATGGACAATTGCTAATTGTGCAACATGTAAAACCCAAATGGGGTGGCTTTTCACGGCCAGGAGCCAAAAACTGAAACCCAACATTTTCTGGGGGATTCGGTGCTGTCAACTTGCAGAAGAAAAAACGCAAAAACCTTTAGCTTGA 1641 0.4369 MDDDERERLLERERLQIQMIRQLDLEHLEVEEVDYSDEDEDADVEVDEEYAIFLSQLNSSSSPQSSEFTFDTYVTPLHTYLGDVEDTRHRTALLDGGAVLNIPLFCLRGVVLFPGATLPLRVIEPRLVAAVERALTQDDIPHTIGVIRIHRDTATRRTKSASVGTTAEIRQFGRLGNGSLNLVTRGQQRFRLRRFWNDVDGVPYGEIQIIEEDLPVRIPRDAFGKLAPLSNMPCSQAVSHTVSSPYSHAKIHRSKIEESDSEPDSEESFENELSLVERKIHLSVVGSRYVHDTMDESANSSDAKFMCKSDQEIRSNLDSRTGNCSTSGKQSWKNELNRCKHICAYSSHKISKAFWPHWTYRMFDSYLLAQRAADMWKQIVGVPNMESLIKKPDVLSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLIRCKSCETTIAKRSDMLVMSSEGPLSAYVNSSGYVHEIMTFYKANGLSLIGPAVSEYSWFPGYAWTIANCATCKTQMGWLFTARSQKLKPNIFWGIRCCQLAEEKTQKPLA* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1144 546 SUPERFAMILY PUA domain-like 101 431 IPR015947 -
Pvu9g1144 546 Gene3D Peptide methionine sulfoxide reductase. 429 545 - -
Pvu9g1144 546 ProSiteProfiles CULT domain profile. 433 540 IPR034750 -
Pvu9g1144 546 PANTHER BNAA09G40760D PROTEIN 6 536 - -
Pvu9g1144 546 Gene3D - 364 428 - -
Pvu9g1144 546 ProSiteProfiles Lon N-terminal domain profile. 102 432 IPR003111 -
Pvu9g1144 546 CDD CRBN_C_like 436 532 IPR034750 -
Pvu9g1144 546 PANTHER CEREBLON 6 536 - -
Pvu9g1144 546 Pfam ATP-dependent protease La (LON) substrate-binding domain 101 431 IPR003111 -
Pvu9g1144 546 Gene3D - 82 210 IPR046336 -
Pvu9g1144 546 SMART lon_5 101 432 IPR003111 -
Pvu9g1144 546 MobiDBLite consensus disorder prediction 247 270 - -
Pvu9g1144 546 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 436 526 IPR004910 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1144 K11793 - gmx:100779918 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1144 9 16749106 16754439 Pvu9g1144 9 16749106 16754439 ECH