Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1140 ATGAAACGGACACACTTCACTCTGCCGCATGTGGCAGACATCACATGCATGGACCCCAACCGCCAGCCGCTCGTGCCGGAGAAGCTCTCCAAAACGGTGCGTTTCCTCGGCTTCTTCATACAAAACGACGTCATGAAGTGGGGGAGGAACATCGGGAAGGCGCTCAACGAGGTCGTGGTGCGCCACCACCAGGCCCTGACGTGCCGCCCACGCGACGCTCACGTGTCTTTCGTGTCGCCGCTGGAGTATCAGTTCAGCTGCAGCGGGAGCCCGCCGCGCCTCTCGCATGCCGGTCGGAGGAAGCTCTCCCCGCCCTCCTCCCGCCGCTCGCCGGCTCATCGGGCTGTCAGGATGTGCCGCGACGGTGCCGGTGGTGACAGCATCGTAGAGAGGCGCGTGAAGATCGCCGGCTCCGCGGCTTCCTTGCTGAACGACGTGGTGGAGAAGGATTTCCACGTGGACGAGGCTGCGGAGGAGTTCATAGCGAGGTTCTACAGAGAGTTGAGGTTGCAGAAATGGTTGGATCACTATTGCTGA 537 0.6201 MKRTHFTLPHVADITCMDPNRQPLVPEKLSKTVRFLGFFIQNDVMKWGRNIGKALNEVVVRHHQALTCRPRDAHVSFVSPLEYQFSCSGSPPRLSHAGRRKLSPPSSRRSPAHRAVRMCRDGAGGDSIVERRVKIAGSAASLLNDVVEKDFHVDEAAEEFIARFYRELRLQKWLDHYC* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1140 178 Pfam Cotton fibre expressed protein 152 172 IPR008480 -
Pvu9g1140 178 MobiDBLite consensus disorder prediction 89 115 - -
Pvu9g1140 178 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 17 177 - -
Pvu9g1140 178 PANTHER DUF761 DOMAIN PROTEIN 17 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1140 Pvu-Chr9 16682755 16683615 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1140 - - gmx:102666753 273.863