Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1129 ATGGAATCCCATGCCTCCAATTCCATTTCTCATTCTAACCATAACAACAACAACAACAACAACCATCATCACCATCACCACCACCACCACCCTAGGTTCAAACCAAGCCAACCCATCTCGGACCGGATAGTCCGTGCCCTCCGCCACCGTCTCCGCCTCCTCCACCGTGCCGGCTCCACCTTCTTCATATTCGGTGCCACTGGTAACGTCTACACGGTCACCCTCTCCTCCACGCCCTCGTGCACCTGCCCTGACCGTACAACCCCATGCAAGCACATTCTCTTTGTTTTCATTCGAGTTTTGGGCGTGTCCCTTGATGACGTGTGTCTAAGGAGGAGGACCCTTCGACCCTGCCAGATCGAACGCCTCCTCGGCACGCCCACGTTGCCGGAGGCAGTGGCAGGCGGCACCCTCCGGCAGAGGTTCCACCAGCTCTTCTTTGGCGGAGGGTCAACGAGGCCAAAGATAGAGACGGAGGAGGGTGCCACGTGCCCGGTTTGCCTTGAGGAAATGGGGAAGGAGCAAAACCTGGTTGCATGTGGGACATGCCGTAACCCTATTCATGAAGAGTGTTTGATGAGGTGGAAGAGAACAAGGGGAAGAAGAACGGCTAGCTGTGTGATTTGTAGAGCGAGGTGGAGGGACAGGGTGGAGCAGGATAAGTATCTGAACCTCTCTGCGTATGTTAGTGAAGATGACATGGGAGAACCTGCTGGGGGACTCTGCACTGGCTGA 735 0.5578 MESHASNSISHSNHNNNNNNNHHHHHHHHHPRFKPSQPISDRIVRALRHRLRLLHRAGSTFFIFGATGNVYTVTLSSTPSCTCPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQIERLLGTPTLPEAVAGGTLRQRFHQLFFGGGSTRPKIETEEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLMRWKRTRGRRTASCVICRARWRDRVEQDKYLNLSAYVSEDDMGEPAGGLCTG* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1129 244 MobiDBLite consensus disorder prediction 18 33 - -
Pvu9g1129 244 SUPERFAMILY RING/U-box 155 217 - -
Pvu9g1129 244 Pfam Ring finger domain 163 210 IPR001841 -
Pvu9g1129 244 PANTHER - 22 234 - -
Pvu9g1129 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 227 IPR013083 -
Pvu9g1129 244 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 22 234 IPR039903 GO:0061630
Pvu9g1129 244 MobiDBLite consensus disorder prediction 1 36 - -
Pvu9g1129 244 ProSiteProfiles Zinc finger RING-type profile. 164 210 IPR001841 -
Pvu9g1129 244 MobiDBLite consensus disorder prediction 1 17 - -
Pvu9g1129 244 ProSiteProfiles Zinc finger SWIM-type profile. 71 101 IPR007527 GO:0008270
Pvu9g1129 244 Pfam SWIM zinc finger 71 99 IPR007527 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1129 - - var:108321788 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1129 9 16541898 16546103 Pvu9g1129 9 16541898 16546103 ECH