Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1118 TCAAACCCACTCTTTGGAGGATTGAAATCATCCAAGTCTATGATGGGGAGGACAAAGAGTGTCTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAGGAAAAATGACGGCTGCTACACCATCTTCTACAACAACAGATACGTTCAAACTGTAACATACAACCTTGAGAAACAAAGTACCAACCCTTTGTTTCTCCCTGCAGTAAAAGGAGATTCATTGGCTGTTATGTGTTCTATGCTTCTAAACTGGCTGAGATTCGGAAAACTAAATAAAGATTATAGCAACACCAATGTGTTTGAGCATTCAGAGAAGTTGTACTCGATTTCGGAGAATCACATCCCACAAGAGATTGACATCTTCACACTAAATACTTTAAAATACTGGGATGTCAATGGCGCATGGAATCGTCCTTTTGCAAGTCACCCCAAGAAAGTTTTGGGTACAGGAGAACTGGTTATTTTTGGAGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTTTCGGCTGATGGAAAGGAACTGGTTCATAAAGCAGATGTAAAACTAGACAGAAGCTGTTTATGCCATGACATAGGTATCACAAGCAGGTATATAGCGATATTGGATTTTCCACTGATTGTAGATTCAAACAGACTACTTAGAAGAGGCCAATTAATCAAATTCGACAAGGAGAAATATGCCAGGATTGGGATAATGCCGATCTATGGTGATGCTAACTCAATCCAGTGGTTTGAGGTGGAACCTAATTGCACATTTCATCTCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCACTAGACTCAATAATTCCAGGACCTGAAGATGGTTTAAGGGAATCTAAGTTATTCTCTCGGTGTTATGAATGGAGATTAAACATGAAAAGTGGGGAGGTTAAGGAGAAATATCTCACTGGAGCAGAAGAATTTATGGATTTTCCAATGATTAATGCAAGTTTTACAGGAATTAAGAATAGATACGGATACACCCAAGTGGTTGATCCCACTGCAAGTTTTGCTGCAGATATTCCTAAATACGGAGCTCTAGCAAAGCTATACTTTGGAGAACCATGTTCAGAATCACCTATGGGAGAGACTCGAAGAGAAGAGCTTATAAGGGTAGAATATCATAGGTTTGAAAGAAATGTATTTTGCACTGGATCTGCCTTTGTCCGGAAGGAAGGTGGCGTTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATACTGGGATATCTCAAGTTCATATAATTGACGCAAAGAAGTTTTCAGGAGAGGCAGTTGCCAAAATTGCAATACCTTGCAGAGTTCCATATGGATTTCATGGAGCTTTTGTGTCAATCTCATTTTAG 1389 0.3938 SNPLFGGLKSSKSMMGRTKSVWVEGEGMLHALYFKRKNDGCYTIFYNNRYVQTVTYNLEKQSTNPLFLPAVKGDSLAVMCSMLLNWLRFGKLNKDYSNTNVFEHSEKLYSISENHIPQEIDIFTLNTLKYWDVNGAWNRPFASHPKKVLGTGELVIFGVDATKPYLEIGIVSADGKELVHKADVKLDRSCLCHDIGITSRYIAILDFPLIVDSNRLLRRGQLIKFDKEKYARIGIMPIYGDANSIQWFEVEPNCTFHLINSFEDGHEVVLWGCRALDSIIPGPEDGLRESKLFSRCYEWRLNMKSGEVKEKYLTGAEEFMDFPMINASFTGIKNRYGYTQVVDPTASFAADIPKYGALAKLYFGEPCSESPMGETRREELIRVEYHRFERNVFCTGSAFVRKEGGVEEDDGWIITFVHNEDTGISQVHIIDAKKFSGEAVAKIAIPCRVPYGFHGAFVSISF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1118 462 Pfam Retinal pigment epithelial membrane protein 18 459 IPR004294 GO:0016702
Pvu9g1118 462 PANTHER OS06G0162550 PROTEIN 1 460 - -
Pvu9g1118 462 PANTHER BETA-CAROTENE DIOXYGENASE 1 460 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1118 Pvu-Chr9 16363997 16366320 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1118 - - gmx:100817207 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1118 9 16363997 16366320 Pvu9g1118 9 16363997 16366320 ECH