Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1113 ATGAGCCCGAGAGCGTCTAACTCAAAATGCTCAGTCCATCAACTGGAGAACATAGATGAAAATGCTCCTGCAGATTGGACTGCATCATCCTGTCCCCCACCTGATACTCCAACTGAGTCTATGGAGTTCCTTGCTAGATCATGGAGTCTTTCAGCCATGGAACTCTCTAAAGCATTGCACAACACCGACATTACGATCTCCACCAGTATAGATATGCCACTTTCTTGCCCTTCAGGTCACCAATTTGATACCAAGAGTTCCACTGCTTCAAAGGATTTATCTAACTGTTGTTATCCTCCAATTTCACCAGGAGACAGTAGCGGAAAGAAGGATTTACTTTTACTCCATCAAGCACTCAGTACAGAATTCCTTTCCGGTCAAAACTTGCTCAGAAATGGGCTTTACAGGAGCTTGCTAAGAGGGAGGACAATGGGTAGGTGGTTGAAAGATCAAAAGGAGAGGAAAAAGCAGGAAATTAGGACCCATAACGCTCATTTGCATGCTGCAGTATCTGTGGCTGGTGTTGCTGCTGCTATTGCAGCGGTTGCAGCATCAACAACATCACCTGAATTGCCTTGTGCCAACCAAAAGACCCCCGCTCCCCTGGCTACTGCTGCAATTGCATCTGCAGCAGCTTTAGTAGCCTCTCACTGCATTGAGATTGCCGAAGATATGGGAGCTGAACATGACCAAATCTTAACAGTAGTCAACTCCGCCATTAATGCAAAAACCAATGGAGATATAATGACTTTAACCGCCGGAGCAGCCACTGCCTTGCGAGGAGCTGCTACTCTAAAGGCAAGGCTGCAAAAGGGGCCTGGAGCAACTGGCATTCCTCTAGTTGAGGAAAAGTGTGACGAAAGCAAAGAAGCAAACATCTTGACAGCACTGGACTATGTTTTTAAAGGAGGAGAACTTCTCAAACGTACAAGAAAAGGAGATCTTCACTGGAAGCAAGTCTCTTTCAATATAAATTCAAATTTGCAGGTTGTAGTCAAAATGAAAAGCAAGCATATGGCAGGAACATTCACAAAAAAGAAGAAATATATAGTGACCGGCGTTTGCAATGATATCCCAGCATGGCCTGGACGGGAGAGGGAAGACATCAATGAAAAGAGGGCATATTTTGGAATAAAAACAACAGACAGGACCATAGCATTTGAATGTGGAAGTAAAGGAGACAAACAGTTCTGGCTTGAGGGTATCCAGTATATGTTGAATTGCCGTGTCAAAGTAACATTATAA 1245 0.4426 MSPRASNSKCSVHQLENIDENAPADWTASSCPPPDTPTESMEFLARSWSLSAMELSKALHNTDITISTSIDMPLSCPSGHQFDTKSSTASKDLSNCCYPPISPGDSSGKKDLLLLHQALSTEFLSGQNLLRNGLYRSLLRGRTMGRWLKDQKERKKQEIRTHNAHLHAAVSVAGVAAAIAAVAASTTSPELPCANQKTPAPLATAAIASAAALVASHCIEIAEDMGAEHDQILTVVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGPGATGIPLVEEKCDESKEANILTALDYVFKGGELLKRTRKGDLHWKQVSFNINSNLQVVVKMKSKHMAGTFTKKKKYIVTGVCNDIPAWPGREREDINEKRAYFGIKTTDRTIAFECGSKGDKQFWLEGIQYMLNCRVKVTL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1113 414 Pfam Plant pleckstrin homology-like region 305 408 IPR013666 -
Pvu9g1113 414 ProSiteProfiles PH domain profile. 299 407 IPR001849 -
Pvu9g1113 414 SUPERFAMILY PH domain-like 289 405 - -
Pvu9g1113 414 Pfam Auxin canalisation 34 273 IPR008546 -
Pvu9g1113 414 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 7 411 - -
Pvu9g1113 414 PANTHER EXPRESSED PROTEIN 7 411 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1113 Pvu-Chr9 16333318 16337772 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1113 - - var:108321855 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1113 9 16333318 16337772 Pvu9g1113 9 16333318 16337772 ECH