Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1108 ATGGCAGAAGCAAAGAGAGAAGTGAGACTTATAGTGTTGGCAAAGTTCAAGGAGGAGGCCACCCCAGAGAAGATTGAAGAGGCCATAACCGAATATGCCAAGCTAGTGGATGTCATCCCTGCCATGAACTCATTCCACTGGGGGAAAGATGATAGTGCCAAAGTTAACTTGCACCTGCATGAAGGTTACACTCATATCTTTGAATCAACCTTTGACAACATAGAAGGTGTTCAGGAGTATGAAGATCATCCTGATCATGCTGTATTTGAGAAACTGCTCCTTTCCTGCACTGAGAAACTGCTTGTCATTACCTATCAACCTACCATTGTTAACCTTCAGAAGTAA 345 0.4319 MAEAKREVRLIVLAKFKEEATPEKIEEAITEYAKLVDVIPAMNSFHWGKDDSAKVNLHLHEGYTHIFESTFDNIEGVQEYEDHPDHAVFEKLLLSCTEKLLVITYQPTIVNLQK* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1108 114 SUPERFAMILY Dimeric alpha+beta barrel 9 108 IPR011008 -
Pvu9g1108 114 PANTHER - 3 112 IPR044662 -
Pvu9g1108 114 ProSiteProfiles Stress-response A/B barrel domain profile. 8 105 IPR013097 -
Pvu9g1108 114 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN HS1 3 112 - -
Pvu9g1108 114 Gene3D - 1 112 - -
Pvu9g1108 114 Pfam Stress responsive A/B Barrel Domain 11 105 IPR013097 -
Pvu9g1108 114 SMART Dabb_2 8 107 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1108 Pvu-Chr9 16259288 16260467 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1108 - - pvu:PHAVU_009G108100g 232.261