Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1094 ATGCGCCCACCGGTTATTCTCAAAACTAACTCTCTCTCTGATTCTTATTCCTCGCCCTGCGATCGCAGACTCAACACTCTCGCCAGACACTTCATTCCCGTTCTTGAACCAATGGCTTCTAACGATAACATCTCCGCTTCGCCAACCGCTGCTTCTGATTCCGTCTTCAACCATCTCGTTCGTGCGCCTGAAGATCCTATCCTCGGGGTGACTGTTGCGTATAACAAAGATCCAAGTCCAGTTAAGCTCAACTTGGGCGTTGGTGCTTACCGAACTGAGGAAGGAAAACCTCTTGTTTTGAATGTAGTGAGGAAGGTTGAACAGCAGCTCATAAATGACTTGTCACGCAACAAGGAATATATTCCAATTGTTGGGCTTGCTGATTTTAATAAATTGAGTGCTAAGCTTATTTTTGGGGCTGAGAGCCCTGCTATTCAAGAGAACAGGGTTACCACTGTTCAATGCTTATCTGGAACTGGTTCATTAAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAGCGAACTATATACTTGCCAACACCAACCTGGGGCAATCACCCCAAGGTTTTCAACTTGGCAGGGTTATCTGTTCAAACATATCGCTACTATGCTCCAGCAACACTAGGGCTTGACTTTGAAGGACTTCTAGAAGATCTTGGTTCTGCTCCATCTGGATCTATTGTTTTGCTACATGCATGCGCACATAACCCCACTGGTGTTGATCCAACCCTTGAGCAATGGGAGCAGATTAGGCAGCTAATAAGATCAAAGGCTTTGTTACCTTTCTTTGACAGCGCTTATCAGGTCTGCAAGTCAGCTGATGTTGCAAGCAGGGTAGAGAGCCAGCTGAAACTTGTGATTAGGCCCATGTACTCGAGTCCTCCCATTCACGGTGCATCCATTGTGGCGGCCATTCTCAAGGACAGTGATTTGTTCAATGAGTGGACTATCGAGTTGAAAGGAATGGCTGACCGAATTATCAGTATGCGTCAACAACTTTTTGATGCTTTACGTTCCAGAGGAACACCTGGTGATTGGAGTCACATTATCAAACAAATTGGCATGTTTACTTTCACAGGATTGAATTCCAAACAAGTTTCCTTCATGACTAATGAGTACCATATATACATGACATCTGATGGGAGGATTAGTATGGCCGGTCTAAGTTCCAAAACAGTCCCACTTCTGGCAGATGCGATCCATGCGGCTGTAACCGGAGGTGTCTAA 1233 0.4534 MRPPVILKTNSLSDSYSSPCDRRLNTLARHFIPVLEPMASNDNISASPTAASDSVFNHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKVEQQLINDLSRNKEYIPIVGLADFNKLSAKLIFGAESPAIQENRVTTVQCLSGTGSLRVGGEFLAKHYHQRTIYLPTPTWGNHPKVFNLAGLSVQTYRYYAPATLGLDFEGLLEDLGSAPSGSIVLLHACAHNPTGVDPTLEQWEQIRQLIRSKALLPFFDSAYQVCKSADVASRVESQLKLVIRPMYSSPPIHGASIVAAILKDSDLFNEWTIELKGMADRIISMRQQLFDALRSRGTPGDWSHIIKQIGMFTFTGLNSKQVSFMTNEYHIYMTSDGRISMAGLSSKTVPLLADAIHAAVTGGV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1094 410 Pfam Aminotransferase class I and II 82 272 IPR004839 GO:0009058|GO:0030170
Pvu9g1094 410 Pfam Aminotransferase class I and II 279 402 IPR004839 GO:0009058|GO:0030170
Pvu9g1094 410 CDD AAT_like 83 390 - -
Pvu9g1094 410 Gene3D Aspartate Aminotransferase, domain 1 55 119 IPR015422 GO:0003824
Pvu9g1094 410 SUPERFAMILY PLP-dependent transferases 54 406 IPR015424 -
Pvu9g1094 410 PANTHER ASPARTATE AMINOTRANSFERASE 53 270 IPR000796 GO:0006520|GO:0008483
Pvu9g1094 410 PANTHER ASPARTATE AMINOTRANSFERASE 271 408 IPR000796 GO:0006520|GO:0008483
Pvu9g1094 410 Gene3D - 120 269 IPR015421 GO:0003824
Pvu9g1094 410 Gene3D Aspartate Aminotransferase, domain 1 270 409 IPR015422 GO:0003824
Pvu9g1094 410 PRINTS Aspartate aminotransferase signature 230 249 IPR000796 GO:0006520|GO:0008483
Pvu9g1094 410 PRINTS Aspartate aminotransferase signature 261 273 IPR000796 GO:0006520|GO:0008483
Pvu9g1094 410 PRINTS Aspartate aminotransferase signature 378 396 IPR000796 GO:0006520|GO:0008483
Pvu9g1094 410 PANTHER ASPARTATE AMINOTRANSFERASE 271 408 - -
Pvu9g1094 410 PANTHER ASPARTATE AMINOTRANSFERASE 53 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1094 Pvu-Chr9 16062171 16066561 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1094 K14454 - gmx:547509 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1094 9 16062171 16066561 Pvu9g1094 9 16062171 16066561 ECH