Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1083 ATGAAAGAGAGAAGACCAAGGCAATCAGGTCTCGCCACTTCAGCTTCTCATACGTCGAAAGTTTATCCCTCAGATCTCACTTTCTCAGAAGAAACAAAGGGGCGATCTAACCGTCTCCGTCGTCGTTCTACTCAACTTTCAGTGGCCATGGCTCCTCCGCCGCCGCAGTCTCATCGATCGCCGTCTCCGTCACAACCGTCAGGGAAGAGTGAAGTCTCCGATCTAAAATCACAGCTCCGGCAGCTTGCTGGGAGCCGAGCTCCGGGTGCTGATGATTCTAAGAGGGATCTCTTTAAGAAGGTGATTTCCAATATGACTATTGGTATTGATGTGTCGTCTCTCTTTGGCGAGATGGTAATGTGCTCTGCAACATCAGACATTGTTCTTAAAAAAATGTGCTATTTATATGTTGGGAACTATGCAAAGGTCAATCCTGATCTTGCACTTTTGACGATTAATTTTCTGCAAAGAGATTGCAAAGATGAGGATCCAATGATACGGGGACTAGCATTGAGGAGTTTGTGTTCTCTCCGGGTGGCAAATCTGGTGGAATATTTGGTTGGGCCATTAGGGTCTGGGTTGAAGGACAATAATAGTTATGTCAGGATGGTGGCAGTTATTGGGGTTTTGAAACTGTACCATATATCGGCTTCCACCTGTATTGATGCAGATTTTCTAGCAACACTGAAGCATTTGATGCTTAATGACCCTGATACTCAGGTAGTCGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCATCCACATCAGAGGAAGCAGCCAGGGAGAGAGAAACTCTACTTAGCAAGCCAGTCGTATATCACCTTCTGAATCGCATTAAGGAGTTCAGTGAATGGGCACAATGTCTTGTACTAGAATTTGTGAGCAAGTACATTCCGGCAGATAGCAGTGAAATATTTGATATGATGAATCTCCTTGAAGATAGACTCCAGCATGCAAATGGTGCTGTTGTCTTGGCAACTGTTAAATTATTTCTACAGTTGACTTTGTCTATGGCTGATGTTCATCAGCAGGTATATGAGCGTATCAAAGCCCCTCTGTTGACTCAAGTGAGCTCAGGAAGTCCAGAACAATCTTATGCAGTTTTAAGTCACCTGCATCTTTTGGTCTTGCGTGCACCTTATATATTTTCCTCGGACTATAAACACTTCTATTGCCAGTACAATGAGCCATCATATGTTAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGCAACACCTATGAGATAGTGACAGAACTATGTGAATATGCTGCAAATGTTGACATTCCCATTGCAAGGGAATCAATTCGAGCTGTTGGGAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGACTTCTCCAGTTTCTTGAGATGGAAAAGGACTATGTTACTTCTGAAGCTTTGGTGCTTGTGAAAGATCTGTTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTTGGAAACATAAGTAGCAAAAATGTGCAAGAACCCAAGGCTAAGGCAGCTCTTATATGGATGTTGGGAGAATATTCTCAGGACATGCACGATGCTCCATATGTCTTGGAGAGTTTAGTTGAAAATTGGGATGAGGAGCATTCCGCTGAGGTTCGCTTGCATCTTCTTACTGCAGTTATGAAGTGTTTCTTTAAGCGCCCACCTGAAACTAAAAAGGCATTAGGTGCTGCATTGGCTGCTGGACTTGCTGATCTTCACCAGGATGTTCATGACAGGGCCTTATTTTATTACAGGCTTCTGCAATACAATGTATCTGTGGCAGAGAGTGTGGTTAACCCTCCAAAGCAAGCTGTTTCCGTCTTTGCTGATACCCAGAGCAGTGAAATCAAAGATCGCATATTTGATGAATTTAACAGTCTGTCTGTTGTATATCAAAAGCCTTCTTATATGTTCACTGATAAGGAACATCGAGGGACATTTGAGTTTGCAGATGAACTTGGAAATCTATCTATTACTGCAGAATCTGGAGAGTCTGTTGTTCCAGCTCAAAGAGTGGAAGCAAATGATAAGGATCTGCTTCTAAGTACTTCAGAAAAGGATGAAGGAAGAGAACCTGGTAGCAATGGTTCAGCCTACAATGCTCCTTCCTACAATGGTTCATCTGCGCCTTCTACAACTTCACAACCACTTGCAGATTTGGCATTTCCAAGTACTGGCATATCAGGTCAAGCATCAGCTTCTAGCTTAGCTATTGATGATCTACTTGGTTTAGATTTTGCAGTTGGAACTGCAGCCACACCTTCACCTCCTCCACCTCCTCCGTTGAACCTAAACCCCAAGGCTGTACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAACTGCCAATATCTATATCAGAGGAATATTCTCTAAGTCCTCAGGGAATCGCATCCTTGACAACTCCCAATGCACTCCTGCGGCACATGCAAAGTCATTCAATACACTGCATTGCATCCGGCGGTCAGTCTCCCAACTTTAAGTTCTTTTTCTTTGCTCAGAAAGCAGAAGCAGCATCAATATATCTTGTAGAGTGTATAATCAACACATCCTCAGCCAAGTCACAGATTAAAGTAAAAGCTGATGACCAAAGTTCATCCCAGGCATTCTCAACATTATTTCAATCAGCCTTATCAAAATTTGGTTTACCCTGA 2694 0.428 MKERRPRQSGLATSASHTSKVYPSDLTFSEETKGRSNRLRRRSTQLSVAMAPPPPQSHRSPSPSQPSGKSEVSDLKSQLRQLAGSRAPGADDSKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFLATLKHLMLNDPDTQVVANCLSALQEIWTLESSTSEEAARERETLLSKPVVYHLLNRIKEFSEWAQCLVLEFVSKYIPADSSEIFDMMNLLEDRLQHANGAVVLATVKLFLQLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAVLSHLHLLVLRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETKKALGAALAAGLADLHQDVHDRALFYYRLLQYNVSVAESVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFADELGNLSITAESGESVVPAQRVEANDKDLLLSTSEKDEGREPGSNGSAYNAPSYNGSSAPSTTSQPLADLAFPSTGISGQASASSLAIDDLLGLDFAVGTAATPSPPPPPPLNLNPKAVLDPGTFQQKWRQLPISISEEYSLSPQGIASLTTPNALLRHMQSHSIHCIASGGQSPNFKFFFFAQKAEAASIYLVECIINTSSAKSQIKVKADDQSSSQAFSTLFQSALSKFGLP* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1083 897 Gene3D - 766 895 IPR012295 -
Pvu9g1083 897 SUPERFAMILY ARM repeat 78 648 IPR016024 -
Pvu9g1083 897 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 66 895 - -
Pvu9g1083 897 MobiDBLite consensus disorder prediction 62 80 - -
Pvu9g1083 897 Pfam Adaptin N terminal region 85 601 IPR002553 GO:0006886|GO:0016192|GO:0030117
Pvu9g1083 897 Pfam Beta2-adaptin appendage, C-terminal sub-domain 778 891 IPR015151 GO:0006886|GO:0016192|GO:0030131
Pvu9g1083 897 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 66 895 IPR026739 GO:0016192
Pvu9g1083 897 SMART B2_adapt_app_C_2 775 892 IPR015151 GO:0006886|GO:0016192|GO:0030131
Pvu9g1083 897 MobiDBLite consensus disorder prediction 709 730 - -
Pvu9g1083 897 MobiDBLite consensus disorder prediction 677 730 - -
Pvu9g1083 897 MobiDBLite consensus disorder prediction 1 91 - -
Pvu9g1083 897 MobiDBLite consensus disorder prediction 9 30 - -
Pvu9g1083 897 MobiDBLite consensus disorder prediction 691 705 - -
Pvu9g1083 897 PIRSF Beta_adaptin 60 897 IPR016342 GO:0015031|GO:0030276
Pvu9g1083 897 Gene3D - 64 659 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1083 Pvu-Chr9 15908924 15918483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1083 - - pvu:PHAVU_009G105700g 1685.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1083 9 15908924 15918483 Pvu9g1083 9 15908924 15918483 ECH