LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g1080	ATGGACTATTGCATGAGAGAAATAGAGGGAAAGCAAGCACATGACCCTTTGTTCAACAAGTCATCGTCTTCTTCTTCTACAACGGTGTGGGTGGAAGGGCCTGTGATAGTAGGAGCTGGGCCCTCAGGGCTTGCAGCAGCAGCATGTCTGAGAGAGAAGAACATCGAAAGTGTGATTCTAGAAAGATCCAATTGCATAGCTTCTCTGTGGCAGCTCAAGACCTATGATCGCCTACGCCTTCACCTACCAAAGCAATTCTGCGAGCTTCCCTTCATGCCCTTCCCTTCTCACTTCCCCACATACCCTTCCAAGCAACAGTTCGTGGAGTACTTGGAAACTTACGCGCAAAGGTTCAAAATTAAGCCAAGCTTCAATGAGACGGTGCAGCATGCAGAGTTTGACGCGAAACTCGCGCTGTGGAGGGTGAAGACCGTCGACAAGGCGGAGAACACCACGGAGTACATGTGCCGGTGGCTGATCGTGGCCACCGGCGAGAATGCCGAGGCGGTGGTGCCGGATATAGAAGGTGTGGAAGAGTTTGGTGCGCCCATAAGACACACGAGTTTGTATAAGAGTGGAGAAGAGTTCAGAGGGAAAAGGGTTTTGGTGGTGGGGTGTGGAAATTCTGGAATGGAAGTTTGCTTAGATCTTTGCAACCATAATGCTACTCCTTCACTTGTCGTCAGAGACACAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTGAAGTGGTTACCCATGCGACTTGTCGATCGATTCTTGCTAATGGTGTCATGGCTTATGCTTGGTGACACTTCTGAATTGGGATTGGATCGACCGTGTTTGGGTCCCCTCGAACTCAAAAACATGTCAGGAAAGACCCCTGTGCTAGATGTGGGTACCCTTGCCAAGATTAAAGGTGGAGACATTAAGGTACGTCCAGGCATTAAGCGGCTTAAACGTCACACAGTGGAATTTGTGGATGGAAGGACAGAGAATTATGATGCAATCATATTGGCGACTGGTTACAAAAGCAATGTGCCCTATTGGCTTAAGGAAGAAGATATGTTCTCTAAGGAAGATGGGTACCCTATGATGCCATTTCCAAACGGGTGGAAAGGTAAAAATGGTCTTTATGCTGTGGGGTTTACCAAAAAGGGACTACTTGGTGCATCCATGGACGCAAAGAGAATAGCTCAAGAAATTGAAAAGTGTTGGGAAGCTGAGGCAAATCATAGAACTGCTTTTGCACGCTCACACTTGCCGCAAACAAATTCATAG	1290	0.4798	MDYCMREIEGKQAHDPLFNKSSSSSSTTVWVEGPVIVGAGPSGLAAAACLREKNIESVILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMPFPSHFPTYPSKQQFVEYLETYAQRFKIKPSFNETVQHAEFDAKLALWRVKTVDKAENTTEYMCRWLIVATGENAEAVVPDIEGVEEFGAPIRHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPMRLVDRFLLMVSWLMLGDTSELGLDRPCLGPLELKNMSGKTPVLDVGTLAKIKGGDIKVRPGIKRLKRHTVEFVDGRTENYDAIILATGYKSNVPYWLKEEDMFSKEDGYPMMPFPNGWKGKNGLYAVGFTKKGLLGASMDAKRIAQEIEKCWEAEANHRTAFARSHLPQTNS*	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g1080	429	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	23	418	-	-
	Pvu9g1080	429	SUPERFAMILY	FAD/NAD(P)-binding domain	197	407	IPR036188	-
	Pvu9g1080	429	PANTHER	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6	23	418	-	-
	Pvu9g1080	429	Gene3D	-	34	414	IPR036188	-
	Pvu9g1080	429	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	33	55	-	-
	Pvu9g1080	429	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	196	220	-	-
	Pvu9g1080	429	SUPERFAMILY	FAD/NAD(P)-binding domain	35	232	IPR036188	-
	Pvu9g1080	429	Pfam	Flavin-binding monooxygenase-like	36	353	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Pvu9g1080	429	PRINTS	FAD-dependent pyridine nucleotide reductase signature	34	53	-	-
	Pvu9g1080	429	PRINTS	FAD-dependent pyridine nucleotide reductase signature	200	218	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g1080	Pvu-Chr9	15876538	15880307	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g1080	K11816		-	gmx:100799546	794.267