Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1068 ATGGGGATAGCAGAAGTGTGCTCCAGGTTCCTGGGGGACTTTTTCCAAGCATTCAAATGCTCCCCACAGAGCTCAGTGTCTTATCACCAAGATCACAATCATCATGCATGCAAATCTGAGAGGATGGTGAAACTTGATGAGAAGATGATTGGTGCCCTTGTTACTGTTTTTGGGATGGAAAGCAATGGAAGAATAAAGAAGGAAAGTGCAAGGGAGGTGGTGGAGAAGCTTGGTTTAATGTGTGATAGGGGTTCAACAGGGTTTGAGCTAGGTGAGGGTGGGTTAATGGATGATGATGAAGTGCCTGTGGAAGAGGTGCTTGGTGAGTTGGAGGACATTTCAAAGCGCAGTGAGGTGTTGCATGAAGCCTTCAAAATCTTTGATGAGGATGGAGATGGATACATAGATGCAATGGAGTTGAAGAGGGTGCTTGATTGCTTGGGTTTGGACCAGGGTTGGGATATGAATGCCATTGAGAAGATGGTGAAGGTGGCAGATTTGAACTTTGATGGCAAGGTTGATTTTGATGAGTTTGAATTGATGATGGGGTAG 552 0.4529 MGIAEVCSRFLGDFFQAFKCSPQSSVSYHQDHNHHACKSERMVKLDEKMIGALVTVFGMESNGRIKKESAREVVEKLGLMCDRGSTGFELGEGGLMDDDEVPVEEVLGELEDISKRSEVLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDQGWDMNAIEKMVKVADLNFDGKVDFDEFELMMG* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1068 183 SUPERFAMILY EF-hand 48 182 IPR011992 -
Pvu9g1068 183 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 108 182 - -
Pvu9g1068 183 Gene3D - 94 183 - -
Pvu9g1068 183 PANTHER CALCIUM-BINDING PROTEIN CML42 108 182 - -
Pvu9g1068 183 ProSiteProfiles EF-hand calcium-binding domain profile. 153 183 IPR002048 GO:0005509
Pvu9g1068 183 CDD EFh 120 178 IPR002048 GO:0005509
Pvu9g1068 183 ProSiteProfiles EF-hand calcium-binding domain profile. 115 150 IPR002048 GO:0005509
Pvu9g1068 183 Pfam EF-hand domain pair 118 182 IPR002048 GO:0005509
Pvu9g1068 183 ProSitePatterns EF-hand calcium-binding domain. 128 140 IPR018247 -
Pvu9g1068 183 SMART efh_1 119 147 IPR002048 GO:0005509
Pvu9g1068 183 SMART efh_1 157 183 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1068 Pvu-Chr9 15715179 15715730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1068 19 182 EF-hand Containing Proteins AT4G20780 32.973 2.47e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1068 - - gmx:100527700 276.559