Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1054 ATGGCGCGAATATGTTTGAGCTTCAGATTCCCAGGAGCACTTCATTTGGCGATTCAGCGCCACTCTAACTCCTCCCTCGTTACCTTCCCTGTTAAAGCTCTCTTTACTCTAAATATTTACCGTTACCGGCGAAGGGAACGATCGGTGACTGGTGGTGTTAGGGCTTTTGAATCCTCTTCTGCTAAACCAATGAGTTGGTGTGATGGGGTTCAGGAACCACGGGTTCTCATCGCACCTGATCCTGGAACCTGTGGAAATGGTCTGGGACAGATGATATCGCTCCGCCATCCCAAGTCTGGAAATGCAACACAGTATCTGTTTGCAAATGGAATGCTTCAAGAACTTCAGTGGTTTAAGAACTTGTATGGATCTTGGTTTTTGGGAGATTATATAACTGAAGATGGTCGGTTGTATTTATCCACACCAATTGATCCTGTTTTCATCATGTTGCCTATATTTGAGGAAGCTAGAATGAAGAAAGGGGATGATCTTGGGAGGTTCAGGCAATTAGATGAGATATTATTTATTGATGGCTATCCAGGATATATGCAGTTAATGTCTGTTGTGGAGAACTGTATGCAAGTTGTTTCTGAAGTCAAAGAAGTTGGATCCTCAAAATTCTTCAGACTTGATGACTCAAAAGTTCTACGTTGGATGTGCTATAAGGTTTGTCAGCTAAAACAGACACTACCCAATTTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGATTGATGCAGTCTCTATATTAGGAGAGTATTTCAAGGAAAAGCCTTGGTTGGAGCTTTTGTGTAACCATCTTAAGTTAAATATACTCGAGGTTATTGGAAAAGTAGAAGTAAATGTTGAAGGAAGTAACTCAGGTTTATGTAACGAATTACAGGAACAACAGCAAGATAAGAAGGGTACAATTGCAAAGAAAGGTAGACAAGCGAAGAAAGTAAAATTGGAGACAGAATCACACAACATTAGAGAGATGTTTACGAGGGCCTCTCGAAAGAAAAGCTAA 1017 0.4061 MARICLSFRFPGALHLAIQRHSNSSLVTFPVKALFTLNIYRYRRRERSVTGGVRAFESSSAKPMSWCDGVQEPRVLIAPDPGTCGNGLGQMISLRHPKSGNATQYLFANGMLQELQWFKNLYGSWFLGDYITEDGRLYLSTPIDPVFIMLPIFEEARMKKGDDLGRFRQLDEILFIDGYPGYMQLMSVVENCMQVVSEVKEVGSSKFFRLDDSKVLRWMCYKVCQLKQTLPNLDKNYAVQSEKDTLIDAVSILGEYFKEKPWLELLCNHLKLNILEVIGKVEVNVEGSNSGLCNELQEQQQDKKGTIAKKGRQAKKVKLETESHNIREMFTRASRKKS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1054 338 Gene3D - 143 271 - -
Pvu9g1054 338 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 147 234 IPR019024 -
Pvu9g1054 338 Gene3D - 75 142 - -
Pvu9g1054 338 PANTHER RIBONUCLEASE H2 SUBUNIT B 58 337 IPR040456 GO:0032299
Pvu9g1054 338 Pfam Ydr279p protein triple barrel domain 90 144 IPR041195 -
Pvu9g1054 338 CDD RNase_H2-B 75 228 IPR040456 GO:0032299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1054 Pvu-Chr9 15589405 15593387 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1054 K10744 - gmx:100792495 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1054 9 15589405 15593387 Pvu9g1054 9 15589405 15593387 ECH