Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1052 ATGGCAGGGTTAAATTTTGAAGCCACATATACTGACAACCATGATATTATGAAGATATTTGAAGCTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGAAAGGTACCCGTGTCAGAATGCAGTGGGAAAGTCATCTGCCTATTTTTCAGTGCAAACTGGTGCAGGCCTTGCAGAGCTTTCACTCCCCATCTTCTTGAACTTTATGAAACACTGAGAAAGAGGGGAATAAATCTAGAGATCATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAGCATGACATGGCTAGCTGTCCCATTTGATGTAAATTTGCACAGAAGACTGATTGACAGATACAGAGTTGATCGAATCCCATCATTTGTTCCATTGTGTTCAGATGCCATAACTGTTAAAGAAGACTTGATTGGCTGCATAGAGGATTATGGTGCTGATGCATTTCCTTTCACTAGGAAGAGACACGAGGAATTGAAAGCCATGGATGAAAGGAAGCGTGAGGAAGCAAACTTGGAAGAATTATTGGGACATGAAGGACGCGACTTTCTCATCTCTGGAGATGATAGAAAGGTGCCCATATGTGAAGTAGTTGGTAAAACCATAGGCCTGTATTTTTGTGCCTACTGGTCTCCTCCTTGCTGTGCCTTCACTGTCCAGCTTACAGATGCATACAACAAACTCAAGGCTGCAAAAGGAGACTGTTTTGAGATTGTTTTAATATCAACAGATAGGGACCTTGTTGAATTCAATATCAACAAAAATAGTATGCCTTGGCTTGCTGTTCCATATGAGGATAGGACAAGGCATGACCTTAGAAGAATCTTTGATATAAAGGGCATTCCTGCTTTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGGGAATGGCAAGTTTATGGTCTCTTCATATGGAGCAGAAGCTTTTCCATTTACCGAATCACGGATAAGAGAGCTAGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCACAGCAGGCTGAGGATGTCAAGCATGAACATGTGCTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCTTGTAGAAAGCAAGGGAAGTTCTGGGCATTCTCTTGTGATGTCTGTGACTATGACCTACACCCAAGTTGTCTTGAAAAGGCCAATTAG 1164 0.4184 MAGLNFEATYTDNHDIMKIFEAEGVEFLLSSEGKVPVSECSGKVICLFFSANWCRPCRAFTPHLLELYETLRKRGINLEIIFISFDRDEDGFKEHFKSMTWLAVPFDVNLHRRLIDRYRVDRIPSFVPLCSDAITVKEDLIGCIEDYGADAFPFTRKRHEELKAMDERKREEANLEELLGHEGRDFLISGDDRKVPICEVVGKTIGLYFCAYWSPPCCAFTVQLTDAYNKLKAAKGDCFEIVLISTDRDLVEFNINKNSMPWLAVPYEDRTRHDLRRIFDIKGIPALVLIGPDGKVISGNGKFMVSSYGAEAFPFTESRIRELEAALRKEGEALPQQAEDVKHEHVLKLDMAKAYVCDSCRKQGKFWAFSCDVCDYDLHPSCLEKAN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1052 387 PANTHER THIOREDOXIN 1 385 - -
Pvu9g1052 387 SUPERFAMILY Thioredoxin-like 31 132 IPR036249 -
Pvu9g1052 387 SUPERFAMILY Thioredoxin-like 191 297 IPR036249 -
Pvu9g1052 387 ProSiteProfiles Thioredoxin domain profile. 177 325 IPR013766 -
Pvu9g1052 387 PANTHER NUCLEOREDOXIN 3-RELATED 1 385 - -
Pvu9g1052 387 Gene3D Glutaredoxin 20 158 - -
Pvu9g1052 387 SUPERFAMILY Cysteine-rich domain 338 383 IPR046349 -
Pvu9g1052 387 Pfam C1 domain 342 382 IPR004146 -
Pvu9g1052 387 Gene3D Glutaredoxin 180 317 - -
Pvu9g1052 387 Coils Coil 156 176 - -
Pvu9g1052 387 ProSiteProfiles Thioredoxin domain profile. 16 170 IPR013766 -
Pvu9g1052 387 Pfam Thioredoxin-like 42 127 IPR012336 -
Pvu9g1052 387 Pfam Thioredoxin-like 202 296 IPR012336 -
Pvu9g1052 387 CDD TryX_like_TryX_NRX 185 315 IPR045870 GO:0004791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1052 Pvu-Chr9 15567623 15569635 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1052 K17609 - gmx:100778160 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1052 9 15567623 15569635 Pvu9g1052 9 15567623 15569635 ECH