LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g1036	ATGGATCAGAAAGTCGATCTCACCGCTCCCCATTCCGTGGGAACCACTGTCATCGGCGTTACTTACAACGGTGGTGCCGTTCTTGGAGCCGATTCTCGAACCAACACCGGAGTGTATGGTGCCAACCGGGCGTCAGACAAAATTACACAGCTCACTGATAATGTCTATGTCTGTCGTTCTGGATCGAATTTTATGCAAGATGATGATAATCGATTGGAGATTACCCGAACTAGATTTGGAAGTTTGCTTAAAAGACATGGAGATTTGACAGAACGTCTAGCTAGGGATTCGGACAAGATAATATTTGAGCGTCTACAGAAAGAGTTTGAAGCTGCACGAGCTTCTCAAACTGAAGAGATTTGTTTAGATGGGGATGCGTGGAATGATGGTCTACTAGCTACAATAAGAGAACGGGTGCATATGGAGTCAGACAGAAAAGCAATGCATGGCGATGCTGACATATTATCATGTCCTCATGAAAAAATTACTTATAAAATTGGAAACAAGGTAATTTGCTGTTTGGAAGGTGCAAGAATTGGTGTACAGTATGAGACATCGTATGCTGGTGAACCTTGTGATTTTTACCATTGTGTGCTGGAGAGTAAGTCATTTCTTGAAAAAATGACTGTCCTTGAACACACAGTTCCATTTTTCCTGCCAATACGTGAAATAGAAAATGATCTCCTTTCATCCAATGCAATGAAATTCATAGATCATGTTGGAGATCTATTGCAGGCTTTTGTGGATAGACGGGAACAGGTCAGACTTATAAAGGAACTTTATGGAAATCAAATCAGAGAGCTGTATCATAGCCTTCCCTACCATATGATTGAACTTGTATTGGATGATTCTGATTGCAAGGTGACAGTCAGCCTTCGATATGCTGATCTAATTTCGGTGCTCCCAACTCGAATATCAGTGTTAGGCTGGCCAATGTTCAATAAAAGTACTACAACTTTGAACAGGAAGGAAGATGGACTCTCTGGAAGTCATTCTACTCCAATTCGCTTAACATATGCAGAAGATGCCTTACGAACCATGGCTTTACCAGAAGCATACGCAGAGATTGTATTAAACTTACCACAAGCGCTTCAGCAGACGTATCATCAAAAAGCCCCCGCTTAG	1125	0.4178	MDQKVDLTAPHSVGTTVIGVTYNGGAVLGADSRTNTGVYGANRASDKITQLTDNVYVCRSGSNFMQDDDNRLEITRTRFGSLLKRHGDLTERLARDSDKIIFERLQKEFEAARASQTEEICLDGDAWNDGLLATIRERVHMESDRKAMHGDADILSCPHEKITYKIGNKVICCLEGARIGVQYETSYAGEPCDFYHCVLESKSFLEKMTVLEHTVPFFLPIREIENDLLSSNAMKFIDHVGDLLQAFVDRREQVRLIKELYGNQIRELYHSLPYHMIELVLDDSDCKVTVSLRYADLISVLPTRISVLGWPMFNKSTTTLNRKEDGLSGSHSTPIRLTYAEDALRTMALPEAYAEIVLNLPQALQQTYHQKAPA*	375

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g1036	374	Pfam	Proteasome subunit	14	62	IPR001353	GO:0005839\|GO:0051603
	Pvu9g1036	374	Pfam	Cenp-O kinetochore centromere component	175	362	IPR018464	GO:0000776\|GO:0034508
	Pvu9g1036	374	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	2	130	IPR029055	-
	Pvu9g1036	374	PANTHER	INNER KINETOCHORE SUBUNIT MAL2	69	367	IPR018464	GO:0000776\|GO:0034508
	Pvu9g1036	374	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	7	62	IPR029055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g1036	Pvu-Chr9	15387529	15397613	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g1036	K11507		-	gmx:100786656	600.127