Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1033 ATGCAAGGCAAGGAAATGGAAGGGTTAACGTCTTCATCGGCGATCGCGCAGAAAACATGGGAGCTCGAGAACAACATCATCCCCATGGACACTCCGGGCGCCGCCTCCTCCTCCTCCACCGCAACCGCCACCAACGCCGATGACTCCATATTCTACTACGACGAGGCCGGTCAGAACGAGTTCCAGCGCGACAAGCCCTGGGCCAATGACCCTCACTACTTCAAGCGCGTCAAGATCTCCGCACTCGCGCTACTCAAGATGGTCGTCCACGCGCGCTCTGGCGGCACTATCGAAGTCATGGGCCTCATGCAGGGCAAGACGGACGCCGACGCCATAATCGTCATGGACGCCTTCGCTCTCCCCGTCGAAGGGACGGAAACGCGCGTTAATGCTCAGGCCGATGCGTACGAGTACATGGTCGATTATTCCCAGACAAACAAACAGGCTGGGCGGTTGGAGAATGTTGTGGGATGGTATCACTCTCATCCCGGGTATGGATGCTGGCTGTCGGGGATCGATGTTTCCACGCAGATGCTGAATCAGCAGTTCCAGGAGCCTTTTCTGGCGGTTGTGATTGATCCCACGAGGACTGTTTCGGCGGGGAAGGTTGAGATTGGGGCTTTCAGGACTTACCCTGAAGGGTATAAGCCTCCGGATGAGCCTATTTCTGAGTATCAAACTATTCCTCTCAATAAGATTGAGGACTTTGGTGTCCACTGTAAACAGTATTATTCCTTGGATATCACTTACTTTAAGTCATCTCTTGATTCACACCTCTTGGATCTTCTGTGGAACAAGTATTGGGTGAATACATTGTCGTCTTCTCCTCTGTTGGGTAATGGAGATTATGTAGCTGGACAAATCTCTGATCTAGCTGAAAAGCTAGAACAAGCAGAGAATCAGTTGGCACACTCACGCTTTGGGCCATTAATAGCACCGACACCTAGAAAGAAAGAGGAAGAATCTCCACTTGCTAAAATTACTCGTGACAGTGCAAAAATAACTGTGGAGCAAGTGCATGGTCTGATGTCACAGGTCATCAAGGACATTTTGTTTAACTCCGTCCATCAAGCAAATAGAAATCGCACAGAACCATCTGGTCCTGAACCAATGATTGAAAGCTGA 1125 0.5049 MQGKEMEGLTSSSAIAQKTWELENNIIPMDTPGAASSSSTATATNADDSIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANRNRTEPSGPEPMIES* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1033 374 PANTHER BNAC07G13420D PROTEIN 40 369 IPR037740 GO:0004222|GO:0008180
Pvu9g1033 374 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 74 185 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pvu9g1033 374 SUPERFAMILY JAB1/MPN domain 76 213 - -
Pvu9g1033 374 SMART pad1_6 76 213 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pvu9g1033 374 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 40 369 - -
Pvu9g1033 374 Gene3D Cytidine Deaminase, domain 2 9 279 - -
Pvu9g1033 374 Pfam Cop9 signalosome subunit 5 C-terminal domain 273 353 IPR040961 -
Pvu9g1033 374 ProSiteProfiles MPN domain profile. 77 214 IPR037518 -
Pvu9g1033 374 CDD MPN_RPN11_CSN5 66 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1033 Pvu-Chr9 15363089 15370537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1033 K09613 - gmx:100817371 733.791