Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g1030 | ATGGGTTTCGGAAGCTCTTCTCTTCTCTCCATGGCTCTTCTTCTCGTCCTCTGCTCAACCATCCAAGCGATGGACGTGCTGAAGGTGCTCAGCGGACCCGAGTACGCGCTCTTCAGCAAAGCCCTAACAGAAGCCAATCTGGTTGACAAAATTAACTCCCTTAACGTCGTCACCGTCTTCCCCCTCTCCAACCCCGCCATGGGTAGCCTCGCCGGAAAGTCACCCGAAGCACTCAAGGCCACCCTCATGACGCACGTTCTTCCCGGCTACTACGACGAGAAGAAGCTTGTGGAATGCATAGGAAGCCAAACTTCAATCGAGACTCTCTACCAATCCTCCGGCCTTGCCCAGGGCAACCAGGGATTCATCAAAGTCCAGCTCATCAACGAAGGCGAGGTCGTCATAGGATCCGCCGCCCAAGCTCCCGGCACAGTCTACGATGCCGGCATGGTGCAGTTCATCGTCAAAGAACCCGAAGTGATTTCGGCTATTGAGCTCACCAAGCCCATTGTCGTACCTGGAATTGATAATTT | 533 | 0.5422 | MGFGSSSLLSMALLLVLCSTIQAMDVLKVLSGPEYALFSKALTEANLVDKINSLNVVTVFPLSNPAMGSLAGKSPEALKATLMTHVLPGYYDEKKLVECIGSQTSIETLYQSSGLAQGNQGFIKVQLINEGEVVIGSAAQAPGTVYDAGMVQFIVKEPEVISAIELTKPIVVPGIDN | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g1030 | 177 | Pfam | Fasciclin domain | 34 | 115 | IPR000782 | - | |
| Pvu9g1030 | 177 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 4 | 176 | IPR033254 | - | |
| Pvu9g1030 | 177 | ProSiteProfiles | FAS1/BIgH3 domain profile. | 22 | 152 | IPR000782 | - | |
| Pvu9g1030 | 177 | Gene3D | FAS1 domain | 24 | 156 | IPR036378 | - | |
| Pvu9g1030 | 177 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 | 4 | 176 | - | - | |
| Pvu9g1030 | 177 | SUPERFAMILY | FAS1 domain | 31 | 132 | IPR036378 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g1030 | Pvu-Chr9 | 15339927 | 15340459 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu9g1030 | - | - | pvu:PHAVU_009G1004000 | 332.028 |