Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1020 ATGCAGGCGGCAGAACAAGGTGGTGACAACAAGAGAAACACAGGTTTTGAGGAAAGGGATTTGGAGAAGGAAATTTCGAAGCTGCGTGGGAGATGGGAACTTGCGTCTATTCTCAATTTTTTGGAGGTGTTTGATCCTATACTTGGAAAAGATTTGAAACTTTCTGCTGAGGATATAGAGATTGGACTTGTGAAGCCTGACGTTTCGCTTGCTCGGCTGCATATTAAGCTTTTGAAGGGTATGCCACCTGTGAGTAAAACACTGGAGGATTCTGACAAATGGGTGACTGCACTCTGTAAGAAACTTACTATGTGGTGGCCATGGGTTGCTGAGGGAGAGATTCCACTTGTACCATCTAAAGGACAGGAGATATCCAAGTACAAGGAAATTGATCCGTCAGATCGTTTACTACTGCTAAAAGCGCTTTGTGAAGTTAGAGCTGATCAACATGATGCAGTGTCATACATAAATGATGCTTTAAAGGAAGGAACCCAAATTTCATCTTTTCGTAAAGATGCCTTAGGAAGAGATAGAACTGGAACATCTTACTGGTATGATGCAACTTCAAAAGGTCAGAGTCACAGACTGTACAGGGAAGTTATTACATCAGACTCAATTCCAAAAGATAAGGGTCATAGGCGCTTATCACTCCCCACCATTCAATGGGAAACACTTGCTTCCAATCTTGAAGAATTTTCAGAAGTAGATGAAAAATTCTCGCTCAGCAAGTCTGCCATGGAAGTTTCTGTTAGCACAAAGCTTCAGAGTGATGCTATTCCTGCTCTTGAAAAGCTTCGGAAGAAGAAAGAAAAAGCAATAAAACAAAAGCAGAGACAGGATATGCTGTTAAAGGATGTTCAGAACTCCTATTGTTCTGGAAATGCACGTGCTTGTCGCACTCGAAGACCTATTTGTTATACATTTGAAGCTTATGATCGAACAATAAAGGAGGCAATACAGCTGACAAATAAAAGGAAAACGTCTCCTGTTGCTGACCAAGATAAAACCAGACAATTAAAATATCAATCCAACACAAAAGATGTTTCAACAGACAGTGATTCTGAACGGGATGTCTTGCAAATATCTGATAATGATGATGATGGTGGTTATGAAGTTGAGAATCATGGTAGCAGCGGAGAGGAGGATGGTGTTGATGAGTTGGTCAACTCAGAAGCTCCCTCAAGCCATGCAGTTACTTATCCCAAGGGGGTTCGCTGCAGCAACCGGCTAGCTGGAGTTCCTAGCCATGCCATCTTAGAAAGCAGAGGCTTAACTACAAAGCAAACATTGAGACAAAGACCCACCCGTAATTCTGCTTTAGAATCTATCATCCTATCGGATTCAGAGGATGAAGTACATGAAGGAAAGACAGATTTGTCCGAGTCTGCTTAG 1392 0.4188 MQAAEQGGDNKRNTGFEERDLEKEISKLRGRWELASILNFLEVFDPILGKDLKLSAEDIEIGLVKPDVSLARLHIKLLKGMPPVSKTLEDSDKWVTALCKKLTMWWPWVAEGEIPLVPSKGQEISKYKEIDPSDRLLLLKALCEVRADQHDAVSYINDALKEGTQISSFRKDALGRDRTGTSYWYDATSKGQSHRLYREVITSDSIPKDKGHRRLSLPTIQWETLASNLEEFSEVDEKFSLSKSAMEVSVSTKLQSDAIPALEKLRKKKEKAIKQKQRQDMLLKDVQNSYCSGNARACRTRRPICYTFEAYDRTIKEAIQLTNKRKTSPVADQDKTRQLKYQSNTKDVSTDSDSERDVLQISDNDDDGGYEVENHGSSGEEDGVDELVNSEAPSSHAVTYPKGVRCSNRLAGVPSHAILESRGLTTKQTLRQRPTRNSALESIILSDSEDEVHEGKTDLSESA* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1020 463 Coils Coil 259 282 - -
Pvu9g1020 463 MobiDBLite consensus disorder prediction 349 382 - -
Pvu9g1020 463 PANTHER REMODELING AND SPACING FACTOR 1 26 368 IPR028938 GO:0006355|GO:0031213
Pvu9g1020 463 MobiDBLite consensus disorder prediction 334 348 - -
Pvu9g1020 463 MobiDBLite consensus disorder prediction 446 463 - -
Pvu9g1020 463 MobiDBLite consensus disorder prediction 427 463 - -
Pvu9g1020 463 MobiDBLite consensus disorder prediction 323 385 - -
Pvu9g1020 463 MobiDBLite consensus disorder prediction 427 444 - -
Pvu9g1020 463 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 26 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1020 Pvu-Chr9 15168540 15173581 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1020 - - gmx:100781163 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1020 9 15168540 15173581 Pvu9g1020 9 15168540 15173581 ECH