Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0984 ATGTCTCAGCTTCTTCCTTCCACTTCCTCCATTTGCCTCCTACTCCTCTGCACTCTCTTCCTCCACCACTCTTTAGCTGACCTTGGCACTGCAGCACGCTATGGCCCTCCCTTTTTGCCCACTGCATGTTTCGGTAGAGACGCATCACAGTTTCCGCCGAGTAACTTCTTTGGTGCTGTTGGGGAGGGTTTATGGGACAATGGTGCCGCATGTGGGAGACAGTATCAGGTGCGGTGCATCAGTGCTGCAGTTCGCGGAACTTGCATTACTGGGCAGATGGTTCAGATAAAGATCGTTGATCGAGCGCAATCATCGGTTTCTAGGCCTTCTTTAGAGGGAACTACGTTGGTCCTCTCCTCCCAGGCCTTTCAGGCCATCGCCAATGCTTCTGCATCCTTCATTAACGTAGAATACCAACAGGTCTGA 426 0.5188 MSQLLPSTSSICLLLLCTLFLHHSLADLGTAARYGPPFLPTACFGRDASQFPPSNFFGAVGEGLWDNGAACGRQYQVRCISAAVRGTCITGQMVQIKIVDRAQSSVSRPSLEGTTLVLSSQAFQAIANASASFINVEYQQV* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0984 141 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 29 141 IPR007112 -
Pvu9g0984 141 SUPERFAMILY Barwin-like endoglucanases 14 141 IPR036908 -
Pvu9g0984 141 Gene3D - 27 141 IPR036908 -
Pvu9g0984 141 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 5 141 - -
Pvu9g0984 141 Pfam Lytic transglycolase 63 138 IPR009009 -
Pvu9g0984 141 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 5 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0984 Pvu-Chr9 14769560 14770773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0984 - - gmx:100803494 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0984 9 14769560 14770773 Pvu9g0984 9 14769560 14770773 ECH