Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0983 ATGGCTGCTACTCCTTCTTCTACATACCCTTTCGGAGTTCCTTTACACTCCCTTGGCCGCAGAGTGGATTGCTCAACCTCCCTGTTCCCCCTCCACGTGGAACTCTCCACAATTTCTTTGTCACCTCGTTCTACTTCGAAGGGATTAGTTGATCGAGTGTGTGCACAGCTTGATAGTGATGACTACCACTGGGAGAAAGTTCCAACACCCATTCTTGATATGGTTGAAAACCCTCTTTACTTGAAGAACTTATCTCTTAAGGAACTGAATCAACTAGCAGTTGAAATTCGTTCAGATTTGTCTTCTATTATGTCAGCTACACAAATATCATCAAAAGCAAGTATGGCAGTGGTGGAGCTGACAGTTGCAATACATCATGTTTTCAATGCTCCAGTTGACAGAATATTGTGGGATGTTGGGGATCAAACATATGCACATAAGATTCTTACAGGAAGGCGATCTCTCATGACAACAATGAAAAGAAAGAACGGTCTCTCTGGTTTTACTTCCCTATTTGAGAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCCGCTGGACTTGGCATGGCAGTTGCCCGGGATATTAAGGGCAGGCAAGAACGTGTAGTTGCAGTTATCAGCAATTGGACAACTATGGCTGGTCAGGCATATGAGGCAATGAGCAATGCAGGATACTTGGACTCAAATATGGTTGTGATTTTGAATGATAGTCGTCACTCTTTACTTCCAAAAATCGAGGAGGGCCCAAAGACATCTGTCAATGCCCTATCTAGTACCCTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGAAGGTTTAGAGAAGCTGCCAAGGGTGTTACAAAACGAATTGGTAGAGGTATGCATGAGTTGGCGGCTAAAGTTGATGAATATGCTCGTGGTATGGTAGGTCCCCTAGGTTCTACTCTTTTTGAGGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGACACAATATTGAGGATCTAATATGTGTTCTGCAAGAAGTTGCTTCCCTGGATTCAATGGGACCCGTCTTGGTACATGTGATAACTGATGAAAATCAGGGAGATGAAAACAATCAGAAAAGTGATATAACAAATAGGCAACAAGATGGTGGCATTTCTTGTGATCCTTTTAAATATGATTCGTTAGATAATGTTGTTCGGCCTCAAACATATGGCGATTGCTTTGTGGAGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTGTGGTTGTTCGTGCTGGAATAGCGATGGAGTCATCCCTTGAATTGTTTCAGGGGAAATTTCCAGATAGGTTTTTTGACGTGGGAATGGCTGAGCAACATGCAGTCACCTTTGCTTCTGGTTTGGCATGCGGTGGATTGAAGCCATTTTGCATTATACCTTCTTCCTTTCTGCAAAGAGCCTATGATCAGGTGGTACACGATGTTGATCAACAGAGAATTCCAGTGCGCTTTGTCATCACAAGTGCAGGATTGGTTGGTTCTGATGGTCCCCTCCAATGTGGAGCATTTGATATAACCTTTATGTCGTGCTTACCAAACATGATTGTCATGGCACCATCTGATGAGGTTGAACTCATGCACATGGTAGCTACTGCTACTCATATCAATAATCAACCAGTCTGCTTTCGGTATCCAAGGGGTGCCCTGGTTGGGAAAAGCTATACTGTAGGCGATGGAATCCCCATTAAGATAGGGAGAGGAAGAGTTCTTGTTGAGGGTAAAGATGTTGCTTTCCTAGGATACGGATCGATGGTTCAGAACTGCCTAATGGCTCATTCACTCCTTGCAAAACTTGGCATTGAGGTGACTGTTGCTGATGCAAGGTTCTGCAAGCCCCTTGACATCAAACTTCTGAGGCAGCTTTGTAAACATCACTCTTTTCTAATCACTGTCGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGCCGAGTTTATTGCAGTTAATGGACTACTCGATGGAAGAATTAAGTGGCGACCAATTGTCTTACCTGACAGATATATTGAGCATGCATCACCAAATGAACAGCTTGACGAAGCGGGGTTGAGTGGACACCACATTGCTGCCACGGCATTGAGTTTGCTAGGCCGTACACGGGAAGCTCTGCAGTTCATGTGTTCCTCCTGA 2157 0.4414 MAATPSSTYPFGVPLHSLGRRVDCSTSLFPLHVELSTISLSPRSTSKGLVDRVCAQLDSDDYHWEKVPTPILDMVENPLYLKNLSLKELNQLAVEIRSDLSSIMSATQISSKASMAVVELTVAIHHVFNAPVDRILWDVGDQTYAHKILTGRRSLMTTMKRKNGLSGFTSLFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELAAKVDEYARGMVGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDENQGDENNQKSDITNRQQDGGISCDPFKYDSLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVRAGIAMESSLELFQGKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCIIPSSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINNQPVCFRYPRGALVGKSYTVGDGIPIKIGRGRVLVEGKDVAFLGYGSMVQNCLMAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAEFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDEAGLSGHHIAATALSLLGRTREALQFMCSS* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0983 718 Pfam Transketolase, C-terminal domain 574 697 IPR033248 -
Pvu9g0983 718 Pfam Transketolase, pyrimidine binding domain 397 558 IPR005475 -
Pvu9g0983 718 Gene3D - 574 705 IPR009014 GO:0003824
Pvu9g0983 718 Hamap 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 71 706 IPR005477 GO:0008661|GO:0016114
Pvu9g0983 718 SMART Transket_pyr_3 396 561 IPR005475 -
Pvu9g0983 718 Gene3D - 396 565 - -
Pvu9g0983 718 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 395 584 IPR029061 -
Pvu9g0983 718 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN 16 716 - -
Pvu9g0983 718 CDD TPP_DXS 113 361 IPR005477 GO:0008661|GO:0016114
Pvu9g0983 718 Pfam 1-deoxy-D-xylulose-5-phosphate synthase 72 356 IPR005477 GO:0008661|GO:0016114
Pvu9g0983 718 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 69 458 IPR029061 -
Pvu9g0983 718 TIGRFAM dxs: 1-deoxy-D-xylulose-5-phosphate synthase 74 703 IPR005477 GO:0008661|GO:0016114
Pvu9g0983 718 Gene3D - 64 363 - -
Pvu9g0983 718 SUPERFAMILY TK C-terminal domain-like 569 705 IPR009014 GO:0003824
Pvu9g0983 718 CDD TPP_PYR_DXS_TK_like 402 555 - -
Pvu9g0983 718 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 16 716 IPR005477 GO:0008661|GO:0016114
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0983 Pvu-Chr9 14755915 14762485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0983 438 656 Acyl Lipid Metabolism Gene Families AT1G55510 24.786 4.09e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0983 K01662 - gmx:100793268 1286.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0983 9 14755915 14762485 Pvu9g0983 9 14755915 14762485 ECH