Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0961 ATGGACTTAGAAGCAAGTGAAAAGGATTCAGTAGTGACTCAGATCAGCATTGGTGGATTTGGCAGTGAGGTAAAAGCAAGTGAGCTGGTGAATTATTTGGAGGATAAAATTGGACTTGTCTACAGGTGTAGGTTGAAGACTTCTTGGACCCCTCCAGAGTCATATCCAGAATTTAATATCACTGATACTGCAAAGATTAAGGGAACAGATGACTATAAGAAAGTCGAGCCTCATGCCTTCGTCCATTTTGCATCTCCAGAATCTGTGACTGCTGCCCTGAATGCTTCAGGTCGTTGTGATCTGTTTTTAAAGAATGAACCCTTAAAGGTCAGCTGTGGACCCGAAAATCCATACTTCCTGAACAAAAGGAGGAGAACTACAATTCCTTTTAAGATGTCTGATGTAATTGTTGAAATTGGGACTTTGGTTAGCCCAGGAGAGTTTTTTGTGGCTTGGAAAGGACCTGATAAAGGAGTAAAATTTCTAGTGGATCCTTTTGATGGCATGTGCAGGTTTTGTTTCACTAGAGATATTGCATTCCCATTCAAAGGTATAGAAAAAGAAGCAGTTATAAAGTGTGATTTTCAGGTGGGATTCCTGGTTAGAGACATTAATGAGATAAGGAGATATAATGATTCATCGTATCTCGTTGTTTTATTACACCTAGCTTCTTCACCTTGGGTTTGGTACAGAACTGCCGAGGATGACATTGAAGATTTAGTGCCATTTGATTTGCTGGATGATGATGATCCTTGGATTAGAACCACTGATTTTACTCCCAGTGGTGCAATTGGTCGATGCAATTTTTATAAAATTTCAATTCCTCCTCGGCATGGTGCAAAATTGATGAAGGCCATGCTTTATCTGAAAGGTCAGAGAGTGCAAATGCAAGAGCTTCCACTTAAACAAACTCTTAGAGCACTGAACGAACCTGATTTTGGCACGCCCATGTCAAATCCTTTCTTCTATATAGATTATCAAGTGGGCATTACTTTTGACATAATGTTTTTGGTCAATGCTATTGTACATAAAGGCATATTCAATCAGCACAGATTGTCAGATAGGTTTTTCGAACTGCTAAGAAATCAACCTAAGGAGCTCAACGTGGCTGCTCTGAAGCATTTATGTTCTTACAAGCGCCCGGTATTTGATGCAACTAAGAGGCTAAAAGTGGTTCAAGAATGGTTGCTTAGAAACCCAAAACTTTATCAGATCTCTAAACAGTTGGATGATATTGTTGAGGTTAGAAGATTGGTTATTACTCCATCAAAAGCGTATTGTATACCCCCTGAAGTTGAACTGTCCAACAGGGTTCTCCGAAAATTCAGAGAAGTTTCAGATTGTTTCTTGAGAGTCACCTTTATGGATGAAGGCATGCAGACAATTAATGTGAATGCCCTTAACTATTATGTTGCTCCTATTGTGAAGGAAATCACATCAAACACTTTCTCTCAAAAGACAAAAATATATAAAAGGGTGAAGACTATCTTGGAAGAGGGATTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCCTTTTCATCAAATCAACTTAGAGATCGTTCTGCTTGGTTTTTTGCTGAAGAAAAGATGAAATGTGATGAAATACGGAGTTGGATGGGCAAGTTTAATCAGAAGAATGTTGCAAAGTGTGCTGCTAGGATGGGACAATGCTTCTCATCTACCTATGCAACGGTTGAAGTTGTTGCGAATGAGGTTAACTCCATGCTACCTGATGTTGAGCGGAATAATTACGTTTTCTCTGATGGTATTGGTATTATCACTCCTGATCTTGCTAGGGAAGTTGCAGAAAAATTGAAATTGGACAATGTACCCTCTGCTTACCAGATCAGATACGCTGGTTTTAAAGGGGTTGTAGCCTCTTGGCCTGCTAAAGGGGATGGGATCAGACTTTCTTTGAGGCCTAGTATGAACAAGTTTCAATCTACCCATACTATCTTGGAGATCTGTGCTTGGACTAGGTTTCAGCCTGGTTTTCTTAACAGGCAGATTATAACATTGCTTTCAGCACTGGGTGTGCCTGATGAAATATTTTGGAAAATGCAGGAGGCAATGCTTTGGAAGTTAAATCAAATGCTTGTGGATGCAGATATCGCTTTTGACGTTCTTACCAAATCATGTGCTGAGCATGGGAATGCTGCAGCAATAATGTTAAGTTGCGGCTTCAGTCCCCTGACAGAACCTCATCTTAGAGGTATGTTAACTTCCACACGTGCTGCACAGCTTTGGGGACTTAGAGAAAAGTCCAGGATTTTTGTATCATCTGGGCGATGGTTGATGGGTGTCTTAGATGAGTCGGGTGTGCTTGAACAGGGGCAGTGCTTTGTTCAAGTGTCTACTCCTTCTCTTGAAAATTGTTTCTCAAAGCATGGATCAAGATTTTCAGAGACAAAGAACCTACAAGTAGTTAAAGGTTTTGTGGTTATAGCCAAAAATCCTTGTCTTCATCCAGGAGATGTACGAGTTTTGGAGGCAGTTGATGCCCCCGATTTACATCATTTATATGATTGTCTTGTTTTCCCTCAGAAGGGTGACAGACCCCATACAAATGAAGCTTCTGGAAGTGACCTTGACGGGGATCTATATTTTGTCACATGGGATGAAGATCTCATTCCACCAAGTAAGAGGAGCTGGATACCTATGGAGTATGCCGCTCAAGAAAGCAAACTTCAGACACGTCAAGTCACGACTCGAGACATCATAGACTTTTTTGTCAGAAACATGGTAAATGAACATTTGGGTGCTATCTGCAACGCACATGTGGTACATGCTGATTCCAGTGACTATGATGCCTTGGATGAGAAATGCATACACTTGGCGGAGCTAGCAGCTACTGCTGTTGATTTTCCAAAGACCGGGAAGCTTGTCACTATGCCTTATCATCTGAAACCAAAACTGTACCCTGATTTCATGGGGAAAGAGAAGCACCAGTCGTACAGGTCGAAGAAAGTTCTGGGTAGACTTTACCGGCGTATCAAAGATGCTTATGATGAAGATATTGATGCACCCTATTTGAACTTTGTGTCTGGTGATATACCATATGATAAAGATCTTGAGGTTCCAGGATCTTCTGCTTTTATTGCTGATTCGTGGGAGCAAAAATGCGCATATGACGGCCAGTTGAGTGGGCTACTTGGTCAATACAAAGTGAAAAGAGAAGAGGAAGTTGTTACTGGACAGATCTGGTCCATGCCTAAATACAACAGTAGGAAGCAAGGGGAGCTTAAGGAGAGGCTGAAGCACTCATACAGTGCCCTGAAAAAGGAATTTAGGCACACTTTTGAGAAATTGAGTTCAGATGTTGGAGAATTAAGCGAGGAAGAAAAAAATTTGTTGTATGAGCAGAAAGCTTCGGCCTGGTATCAGGTGACATATCATCCTTACTGGGTCAAAAAGTCTCTTGATCTGCAAGATAAATCCCCAGAGAGCCAAGAGGCTGATTGTTTGGGAAGCACTGTGATGTTGAGTTTTCCTTGGATTGCAGTTGATTACCTAGCTCGCACAAAGATAAGAGAACGGCATCGGAAATCTGGAAATTTTGATTCAACTAAGCCAGTTGATTCTCTGGCAATGTATCTATCTGAAAGGTTATAG 3615 0.4094 MDLEASEKDSVVTQISIGGFGSEVKASELVNYLEDKIGLVYRCRLKTSWTPPESYPEFNITDTAKIKGTDDYKKVEPHAFVHFASPESVTAALNASGRCDLFLKNEPLKVSCGPENPYFLNKRRRTTIPFKMSDVIVEIGTLVSPGEFFVAWKGPDKGVKFLVDPFDGMCRFCFTRDIAFPFKGIEKEAVIKCDFQVGFLVRDINEIRRYNDSSYLVVLLHLASSPWVWYRTAEDDIEDLVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKGQRVQMQELPLKQTLRALNEPDFGTPMSNPFFYIDYQVGITFDIMFLVNAIVHKGIFNQHRLSDRFFELLRNQPKELNVAALKHLCSYKRPVFDATKRLKVVQEWLLRNPKLYQISKQLDDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNTFSQKTKIYKRVKTILEEGFYFCGRKYSFLAFSSNQLRDRSAWFFAEEKMKCDEIRSWMGKFNQKNVAKCAARMGQCFSSTYATVEVVANEVNSMLPDVERNNYVFSDGIGIITPDLAREVAEKLKLDNVPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMNKFQSTHTILEICAWTRFQPGFLNRQIITLLSALGVPDEIFWKMQEAMLWKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEDLIPPSKRSWIPMEYAAQESKLQTRQVTTRDIIDFFVRNMVNEHLGAICNAHVVHADSSDYDALDEKCIHLAELAATAVDFPKTGKLVTMPYHLKPKLYPDFMGKEKHQSYRSKKVLGRLYRRIKDAYDEDIDAPYLNFVSGDIPYDKDLEVPGSSAFIADSWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLSSDVGELSEEEKNLLYEQKASAWYQVTYHPYWVKKSLDLQDKSPESQEADCLGSTVMLSFPWIAVDYLARTKIRERHRKSGNFDSTKPVDSLAMYLSERL* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0961 1204 CDD RRM_SF 15 111 - -
Pvu9g0961 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 7 1203 - -
Pvu9g0961 1204 Pfam RNA dependent RNA polymerase 420 999 IPR007855 GO:0003968
Pvu9g0961 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 7 1203 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0961 Pvu-Chr9 14418046 14423283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0961 K11699 - gmx:100795178 2300.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0961 9 14418046 14423283 Pvu9g0961 9 14418046 14423283 ECH