Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0950 ATGGCTCCCACGACGATCCGGAAGGCGATTGGGGTGGTCAAGGACCAGACCAGCATAGGGATTGCCAAGGTCGCCAGCAACATGGCGCCGGAGATGGAGGTCGCGATTGTCAAGGCCACCAGCCACGACGACGACCCCGCCAGCGAGAAGTACGTCAGGGAGATCTTGAACCTCATGTTGCATTCGCGCGGCTACGTCCACGCCTGCGTCTCCGCGGTGTCCAAGCGTTTGGGGAAGACGCGCGACTGGATTGTGGCGCTCAAGGCGCTCATGCTCGTACACCGCCTCATGAACGAGGGTCCACCTCTGTTCCAGGAGGAGATCCTTTACGCCACCCGCAGAGGAACACGGCTCCTCAATTTGTCTGATTTCAGAGACGAGGCTCATTCCAGCTCCTGGGATCACTCCGCTTTTGTGAGAACCTATGCTATGTATCTCGACCAGAGGCTTGAGTTGATGCTCTTTGATAGAAAAAGCACCGCCTCCGGTGCCGGTGGTAGTAGTGTTGGCGGCGGCGGTGCCGATGATAGGTTTGGCGGAAGGGACAATTTCCGGTCGCCGCCGTATGAGTACGGTGGTGGGGAGTATAAAGGGGAAGGTAGTTATGGGTATGAGAATGGGATGAGGAGGACGAGATCTTTTGGGGACATGAGTGAATCGGTGGGCAGGGGGGACGAGAAGAGTGTTGTCAGTGTGACTCCTTTGAGGGATATGACTCCGGAGAGGGTTTTCGGTAAGATGGGTCATTTGCAGAGGTTGTTGGATAGGTTTTTGGCTTGTAGGCCTACTGGGTTGGCGAAGAATAGTAGGATGGTCTTGATTGCTTTGTATCCAGTGGTTAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTGTTGCTTGACAAGTTCTTTGATATGGAGTATGCCGATTGCGTGAAGGCTTTTGATGCTTATGCCAGTGCGGCTAAGCAGATTGATGAGCTTGTCACTTTCTACAATTGGTGTAAGAATACGGGTGTGGCGAGGTCCTCGGAGTACCCTGAGGTTCAGAGGATTACCAGCAAGTTGCTCGAGACGTTGGAGGAGTTTGTGAGGGATAGAGCCAAGAGGCCGAAGAGTCCCGAGAGAAAAGAGGAGGCTCCACCGGTAGAGAAGGTAGAGGAGGAGCCAGCACCAGATATGAACGAAATCAAGGCATTGCCTCCACCGGAGAATTATACCCCTCCTCCTCCACCTGAGCCGGAGCCTAAGCCCCAGCCTCAGGTTACAGAGGATTTGGTGAATCTGAGAGATGATGCAGTCACTGCAGATGACCAGGGTAATAAGTTTGCTTTGGCCCTGTTTGCTGGTGCGCCTGCCAATAATGCAAATGGATCATGGGAAGCATTCCCTTCTAACGGACAACCAGAAGTGACTTCAGCCTGGCAAACCCCGGCTGCAGAGCAAGGGAAAGCTGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTGTCGAAGCAGAAGGCAGCTTTAGGTGGTGGTTTGGATCCTCTATTGTTGACTGGCATGTATGATCAAGGAATGGTCAGGCAGCATGTCAGCACTACCCAATTGAGTGGAGGGAGTGCCAGCAGTGTGGCATTGCCAGGAGCGGGAAAGACTACAACCCCTGTTTTGGCTCTCCCTGCCCCAGATGGATCTGTGCAGCCTGTTAATCAAGATCCATTTGCTGCATCATTGAGCATTCCACCCCCATCCTATGTCCAAATGGCTGATATGGAGAAGAAGCAGCATTTGCTCGTGCAGGAGCAGCAGGTGTGGCATCAGTATGCAAGGGATGGGATGCAAGGCCAAACTAGTTTGACCAAACTGAGTGGCACTGGATACCATGCTGGAGGCCCTATGCCCATGATGCCTTATGGAATGCCCCCTGTGAATGGAATGGGACCTCCAACCGGGTATTATCACACTCCTTACTGA 1956 0.5286 MAPTTIRKAIGVVKDQTSIGIAKVASNMAPEMEVAIVKATSHDDDPASEKYVREILNLMLHSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNLSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKSTASGAGGSSVGGGGADDRFGGRDNFRSPPYEYGGGEYKGEGSYGYENGMRRTRSFGDMSESVGRGDEKSVVSVTPLRDMTPERVFGKMGHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYADCVKAFDAYASAAKQIDELVTFYNWCKNTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPPVEKVEEEPAPDMNEIKALPPPENYTPPPPPEPEPKPQPQVTEDLVNLRDDAVTADDQGNKFALALFAGAPANNANGSWEAFPSNGQPEVTSAWQTPAAEQGKADWELALVETASNLSKQKAALGGGLDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGAGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQTSLTKLSGTGYHAGGPMPMMPYGMPPVNGMGPPTGYYHTPY* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0950 651 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Pvu9g0950 651 PANTHER - 5 627 - -
Pvu9g0950 651 MobiDBLite consensus disorder prediction 161 190 - -
Pvu9g0950 651 CDD ANTH_N_AP180_plant 33 152 - -
Pvu9g0950 651 MobiDBLite consensus disorder prediction 400 417 - -
Pvu9g0950 651 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 627 IPR045192 GO:0048268|GO:0072583
Pvu9g0950 651 MobiDBLite consensus disorder prediction 363 392 - -
Pvu9g0950 651 Gene3D - 2 156 IPR008942 -
Pvu9g0950 651 SMART enth_2 30 160 IPR013809 -
Pvu9g0950 651 SUPERFAMILY GAT-like domain 234 364 - -
Pvu9g0950 651 Pfam ANTH domain 32 364 IPR011417 GO:0005543
Pvu9g0950 651 Gene3D ANTH domain 229 375 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu9g0950 651 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Pvu9g0950 651 MobiDBLite consensus disorder prediction 363 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0950 Pvu-Chr9 14313626 14316300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0950 - - gmx:100787076 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0950 9 14313626 14316300 Pvu9g0950 9 14313626 14316300 ECH