Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0945 ATGCAGAGACGAAGTCCTCCGAAGCACAGGCACGATGGAACTTCGCCGCTGCCTCTCGGCATGGATTGGAGCCCCGCGCCTCGGAAATGGAATGGGCAAGATACAGTATGGCCACACAATCATCGTACTGGTTGGAGTTATTGTGTCACGATACCTTCTTGGTCCTTTGTTCCAAAATCAAGGAATTCAGATCCTGTAGTGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCGGAAGGGATTACAAGGCTCCATGGAGTATTAAGAAGGTTCAATGATTTTTTAAAGTTGTTTGCTGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCACCACCCAAGGGACTCTTGCGATTGAAAAGCAGAGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAAGAGTGGATCACGAAACTACTGTCTGACATTGATGTATCAAGATGTGCTGCAGTGGCATCATTTCTCGAACTAGAAGCAGCTGCTAGATTTTCATTCCAAGATGCAAGCCAGCAAAATTCTGTAACAGATCCTGATTCTAATAACACGGTTTATTCTGTGCAATCACCTCACCAGTCAAGCTTATCACTACTTGCTGGCAGTTCGTCTGTTGCCTCCGATTATGGTAGTGATACTGCATATGAGCCATCTGACCTAGGAACACCAAGAGTTGGACAGGATGATAATTCTGATGTTGGTACAGATGATCTAACATTAGATGAAGATATGTCAAATCCAATAGAAAAACTTGTGAAATATGGCATATCAAATATTGACGAAGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGACATGTGAACTATGTTACACAGAAGGACAGAAATAATGGAAATTTATATGATTCTTCACTTTTAGCTAATAATACCATGGAACTTTTCTCTGAGCCTGGGCATGCCAAGGTTGTTGGTCATGTTCGTAAGCTTTCAAATGAGAGTTTTGGAAGTGATGGAAGTTCATTACGAGGTAGTGACATCTCTAATTTTGGGATTCCAAATTCCTCTGGTGATGGCTCTCATGACCTTCCTGGATCTGCTTCGGTTTCAAGGGACACAGATATTATGGGCCACACAAAGTTAAAGCCTACTGGTGATACTCAGTTAGTCTTTCCAGTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACCATGCAACGAAGGCTAGGCACTGCAAAAACAGATACGGAGGACCTTATAGTTAGATTAAATCAAGAAATAACTGCAAAGGATTTTCTTGCAACTAAGGTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTAATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAATCAATGGAAATGGAGATGAAACTAAAGTCAGAATCGGGGGGGAATTCTTACCAGAATTCAGCAAAGGAATCAATTGTTCACCAGAATGATGTACTGTTACAGAATTTAGAAACTACTAAAGAGCATCTAGAAATGTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAGGCGGATGTTAAAGTTCTGGTTAAAGAGGTCAAATCTCTTCGTAATTCCCAAACAAAGTTAAAGAAAGAGCTTAGTGAGTCGATAAAGGAAAACAGTGAAACTGAGAAACTACTACTTCACGAAAGAGAGAAGAGGGAACAGGCAGAAGCTGCGCGGAGAAAACTGCTTGAGAAATGCAGGTTTCTTTTCAACCAGCTTCAAGAGAGCAATGTCAGTCTTCCTTATGAATGTGAAGATAGGACAGTCATGAATTCATCGTCATTGAGTGATGCCTTTAATAAATTAACAACATCCGATGACCAAATGGACATCGTACTATCAGAAGTAAAAAACTTAGATAAGGAATATGGAAGTGCGGCTTCCAATGTAGATAAAGCCAATGGCATAAAAGATGGTGTAATCTGTGATGATGAAGTGGGTAAGATCATAGCAGACTTGTTTATGGATAATGTTAGACTGAGAAAACAGACAAACCGTGTCACAAGGCATACTCTGAAATTGGACATGACAGCAAGTGATGATACCCCTTCAATGGAAACTGTATCAAGTATTTAG 2163 0.4059 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGQDTVWPHNHRTGWSYCVTIPSWSFVPKSRNSDPVVFYRVQVGVQSPEGITRLHGVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWITKLLSDIDVSRCAAVASFLELEAAARFSFQDASQQNSVTDPDSNNTVYSVQSPHQSSLSLLAGSSSVASDYGSDTAYEPSDLGTPRVGQDDNSDVGTDDLTLDEDMSNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKANARHVNYVTQKDRNNGNLYDSSLLANNTMELFSEPGHAKVVGHVRKLSNESFGSDGSSLRGSDISNFGIPNSSGDGSHDLPGSASVSRDTDIMGHTKLKPTGDTQLVFPVDQRNKLNRILSTMQRRLGTAKTDTEDLIVRLNQEITAKDFLATKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSMEMEMKLKSESGGNSYQNSAKESIVHQNDVLLQNLETTKEHLEMLSKQYGELEAKSKADVKVLVKEVKSLRNSQTKLKKELSESIKENSETEKLLLHEREKREQAEAARRKLLEKCRFLFNQLQESNVSLPYECEDRTVMNSSSLSDAFNKLTTSDDQMDIVLSEVKNLDKEYGSAASNVDKANGIKDGVICDDEVGKIIADLFMDNVRLRKQTNRVTRHTLKLDMTASDDTPSMETVSSI* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0945 720 Coils Coil 507 534 - -
Pvu9g0945 720 MobiDBLite consensus disorder prediction 332 367 - -
Pvu9g0945 720 Pfam PX domain 87 158 IPR001683 GO:0035091
Pvu9g0945 720 Coils Coil 429 456 - -
Pvu9g0945 720 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g0945 720 Gene3D - 46 186 IPR036871 GO:0035091
Pvu9g0945 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 715 IPR044588 GO:0015031
Pvu9g0945 720 SMART PX_2 43 160 IPR001683 GO:0035091
Pvu9g0945 720 MobiDBLite consensus disorder prediction 332 365 - -
Pvu9g0945 720 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Pvu9g0945 720 MobiDBLite consensus disorder prediction 210 242 - -
Pvu9g0945 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 715 - -
Pvu9g0945 720 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Pvu9g0945 720 Coils Coil 539 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0945 Pvu-Chr9 14243575 14253075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0945 - - gmx:100792151 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0945 9 14243575 14253075 Pvu9g0945 9 14243575 14253075 ECH