Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0925 ATGATGGAATCCGGAGCTCACTTCTGCAACTCTTGTGGTGAACAAGTAGGACATGATGCTAATGGGGAGGTGTTTGTGGCTTGTCATGAGTGCTATTTCCCAATTTGCAAGGCTTGTTTTGAATATGAAGTCAATGAGGGTCGTAAGATCTGCTTGAGATGTGCCACTCCCTATGCTGATAGAGCAAAAGATGATGATCAAACCACTACGGCTGCCCAGATCAATGTTTCTCAGGATGTTGGGCTCCATGCTAGGCATGTCAGTACTGTGTCCACAGTGGATAGTGAACTGAATGATGAATCTGGGAATCCTATCTGGAAAAATAGAGTGGAAAGCTGGAAGGAAAAGGATAAAAAGAACAAGAAGAAAAAATCTGCACCTAAGGCTGAAAATGAGGCACCAATTCCACAAGAACAGCAGATGGAAGAAATACAGTCCTCTGAGGCTGCAGCTGCTGAGCCACTTTCAACCATTATTCCAATCCCAAAAACAAGAATCACACCATACAGAATTGTGATAGTCGTCCGACTTATAATATTGGGTCTTTTCTTCCATTATCGAGTTACAAATCCTGTTGACAGTGCTTTTGGTCTGTGGTTGACATCCATCATCTGTGAGATTTGGTTTGCATTTTCTTGGGTATTAGATCAGTTCCCTAAATGGTATCCGATCAACAGGGACACTTTTATTGACAGGCTTTCTGCAAGATATGAAAGGCCTGGTGAACCCTCTCAGCTTTCTGCTGTGGATTTCTTTGTCAGTACAGTCGATCCTCTGAAAGAACCACCGTTGATCACTGCCAACACAGTGCTTTCTATTCTTGCTGTGGACTACCCTGTGGATAAAGTATCCTGTTATGTGTCTGATGATGGTGCTGCAATGCTGACATTTGAGTCCCTTGTGGAGACAGCTGACTTTGCAAGAAAGTGGATTCCATTTTGCAAAAAGTTTTCGATTGAACCACGAGCACCTGAGTTTTACTTCTCTCAGAAGATTGACTACCTTAAGGACAAAGTACAACCTTCTTTTGTGAAGGAACGTAGAGCAATGAAGAGAGACTATGAAGAGTTTAAAGTGAGAATTAATGCTTTGGTAGCAAAGGCTCAGAAAACACCAGATGAAGGATGGACTATGCAAGATGGAACCTCATGGCCAGGAAATAACTCCCGTGATCACCCTGGCATGATTCAGGTTTTCCTTGGACACAGTGGTGCCCATGACATAGAAGGAAATGAACTTCCCAGGTTGGTGTATGTTTCCAGAGAGAAAAGGCCAGGTTACCAACACCACAAAAAGGCTGGTGCTGAAAATGCACTGGTGAGGGTGTCTGCAGTTCTCACAAATGCTCCCTTCATTCTCAATCTTGATTGTGATCATTATGTGAACAATAGCAAGGCTGTTCGGGAAGCAATGTGTTTTCTGATGGATCCAGTAATGGGTAGAGAATTGTGCTATGTGCAGTTTCCCCAGAGATTTGATGGTATTGATCGTAGTGATCGATATGCCAATCGTAACACAGTTTTCTTTGATGTTAACATGAAAGGGCTTGATGGCATTCAAGGACCTGTATATGTGGGAACTGGATGTGTTTTCAATAGACAGGCACTTTATGGCTACAGCCCACCTTCCATGCCCAAATTACCGAAATCATCATCCTGTTGTTGCTGTCCCTCAAAGAAGCAAACCAAAGATGTCTCGGAGCTTTATAGAGATGCAAAGAGAGAAGAACTTGATGCTGCTATTTTTAATCTTAGGGAGATGGACAATTATGATGAATATGAGAGGTCAATGCTGATTTCACAAACGAGCTTTGAGAAAACATTTGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAGTGGAGGTCTGCCAGAATCATCTGATCCCTCAATGCTGATCAAGGAGGCCATTCATGTTATTAGCTGTGGATATGAAGAGAAGACTGCATGGGGAAAAGAGATTGGATGGATCTATGGTTCAGTGACTGAGGATATCTTAACGGGTTTCAAGATGCAATGCCGGGGATGGAGGTCAGTTTACTGCATGCCCTTAAGGCCTGCATTCAAAGGTTCAGCACCAATCAATCTTTCTGATCGATTGCACCAAGTTCTTCGATGGGCCCTTGGATCAGTTGAAATCTTCTTCAGTAGACATTGCCCCCTCTGGTATGGTTTTGCAGGAGGTCGCCTCAAATGGCTGCAGAGACTTGCTTACATAAACACCATTGTCTACCCGTTTACATCCCTTCCTCTCATTGCTTATTGCACTTTGCCTGCAATTTGCCTTCTCACAGGAAAATTCATCATACCAACGCTTTCCAACCTTGCAAGTGCCCTCTTTCTTGGACTTTTCCTGTCTATTATAATCACTAGTGTGCTTGAGCTGCGTTGGAGTGGTGTGACCATTGAAGCTTTGTGGCGTAATGAGCAGTTCTGGGTGATTGGAGGAGTTTCAGCCCATCTGTTTGCTGTGTTCCAAGGATTCCTCAAGATGTTGGCTGGTGTTGACACTAACTTCACTGTCACTGCCAAAGCTGCTGAAGACAGTGAGTTTGGTGAACTATATATGATCAAGTGGACCACACTCTTAATTCCTCCAACCACCCTTATCGTTATTAACATAGTTGGTGTTGTGGCTGGATTTTCTGATGCACTTAATGGAGGATATGAGTCTTGGGGACCACTTTTTGGAAAGGTTTTCTTTGCCTTCTGGGTTATTTTCCATCTTTATCCATTCCTCAAGGGTCTCATGGGTCGCCAAAATCGTACTCCAACCATTGTTATTCTGTGGTCAGTGTTGTTGGCCTCTGTCTTCTCTCTGGTGTGGGTGAAGATTAACCCTTTTATCAGCAGAGCTGATAGCTCAAGCCTCTCCCAGACCTGCATTTCTATAGATTGTTAA 2907 0.4341 MMESGAHFCNSCGEQVGHDANGEVFVACHECYFPICKACFEYEVNEGRKICLRCATPYADRAKDDDQTTTAAQINVSQDVGLHARHVSTVSTVDSELNDESGNPIWKNRVESWKEKDKKNKKKKSAPKAENEAPIPQEQQMEEIQSSEAAAAEPLSTIIPIPKTRITPYRIVIVVRLIILGLFFHYRVTNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWYPINRDTFIDRLSARYERPGEPSQLSAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWIPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEFKVRINALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGHSGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVMGRELCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYSPPSMPKLPKSSSCCCCPSKKQTKDVSELYRDAKREELDAAIFNLREMDNYDEYERSMLISQTSFEKTFGLSTVFIESTLMESGGLPESSDPSMLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSVYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASALFLGLFLSIIITSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAAEDSEFGELYMIKWTTLLIPPTTLIVINIVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFISRADSSSLSQTCISIDC* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0925 968 Pfam Zinc-binding RING-finger 5 60 IPR027934 -
Pvu9g0925 968 MobiDBLite consensus disorder prediction 109 129 - -
Pvu9g0925 968 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 2 968 - -
Pvu9g0925 968 SUPERFAMILY RING/U-box 2 66 - -
Pvu9g0925 968 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 396 540 IPR029044 -
Pvu9g0925 968 SUPERFAMILY Nucleotide-diphospho-sugar transferases 263 765 IPR029044 -
Pvu9g0925 968 MobiDBLite consensus disorder prediction 108 147 - -
Pvu9g0925 968 Pfam Cellulose synthase 249 959 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu9g0925 968 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 79 IPR013083 -
Pvu9g0925 968 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0925 Pvu-Chr9 13993463 13999583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0925 1 968 Glycosyltransferase AT4G18780 81.726 0.0 1669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0925 K10999 - gmx:100806522 1823.52