Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0909 ATGTCGATTATACCGAAAGGCGATTCGGTTCAAATCAGGGAGGTTTGGAACGATAACCTCGACGAGGAGTTTGCGTTGATCCGCGAAATCGTGGACGAGTATAACTACGTGGCGATGGATACCGAGTTTCCCGGCGTGGTACTCCGTCCGGTGGGGAATTTCAAGAACATCAACGACTATAACTACCAAACGCTGAAGGACAACGTGGACATGTTGAAGCTGATCCAATTAGGTCTTACCTTCTCCGATGAGAACGGGAACCTCCCTACCTGCGGCTCCGAGAGTCCCTGCATCTGGCAATTCAACTTTCGGGAGTTCAACATCAGCGAAGACATCTTCGCTAGCGATTCGATCGAGTTGTTGCGCCAGTGCGGGATCGATTTCAAGAAGAACAGCGAGAAGGGAATCGACGTGAACCGGTTCGGGGAGCTTCTCATGTCCTCTGGAATTGTGCTGAACGACGCCGTTCATTGGGTCACCTTTCACAGTGGCTATGATTTTGGTTACCTCCTTAAGCTGTTGACATGCCGAAGCTTGCCGGATACGCAGACTGGGTTCTTCGATTTGATCAAGATGTATTTTCCTATGGTGTATGATATCAAGCATCTGATGAAGTTCTGCAACAGCCTCCATGGTGGATTGAACAAGCTTGCAGAGTTGTTGGAGGTGGAGAGAGTTGGTGTGTGCCATCAGGCTGGGTCTGATAGTTTACTCACTTCTTGTACATTTAGAAAGTTGAGGGATACATTCTTCAACGGCTCAACGGAGAAATATTCTGGTGTGTTGTATGGTTTAGGCGTTGAGAATGGACAGACTAATTGA 822 0.4818 MSIIPKGDSVQIREVWNDNLDEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGSESPCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNSEKGIDVNRFGELLMSSGIVLNDAVHWVTFHSGYDFGYLLKLLTCRSLPDTQTGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLRDTFFNGSTEKYSGVLYGLGVENGQTN* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0909 273 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 1 272 - -
Pvu9g0909 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 272 IPR039637 GO:0004535|GO:0030014
Pvu9g0909 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Pvu9g0909 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Pvu9g0909 273 Gene3D - 2 269 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0909 Pvu-Chr9 13800540 13802290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0909 K12581 - gmx:100785970 546.584