Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0901 ATGGCGACGACGACGACAGATAAAGAATTGGAAGAGCAACTTCTCGAAGCCGGGAACAAACTCGCAGATCCGCCGTCATCCGTGGAGGAGCTTCTCTCACTTCTAGATCAAGTAGAGAGTTTCTTATCAAGGGTTGAACAGTCACCTTCAAACTCTATGCAAATTGCACTCTCTCCATCATTGAAAGCATTGATTGCAGACAAACTTTTGAGGCACTCAGATGATGATGTCAAAGTTGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACTGCACCTGAAGCTCCTTATGATGATGATCAAATGAAGGAGGTCTTTCAAGTAATAGTATCTTCATTTGAAAATCTACATGATAAGTTAAGTCGATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCAAAAGTCAGATCATGTGTCGTAATGCTGGATCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTTAAAGCAATAAGGGAACATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCTTAGACCTTCTGTCTACACTTCTGGCCACAGTTAAAAAAGATGACGAGGAAGCTTTTCCAATTGCCAAAAAATTGGGTGAGAGGGTCCTTGAAAGTTGTGCAACCAAGCTTAAACCCTATTTGGTTCAAGCAGTGAAATCCTTGGGTATACCTATGGGTGATTATAGTTTGGTACTTTCTTCAATATGCCAAGACACATCTGATACCCTGGAGAAAAATGATACATGTGTTACTAGTGAGCACGTGGAAGATAAGGTTGATTTGGCAAAACAGCCACGTGAGGATTCAGCACATGTAGACGAGAAGGATCCAAGGGAAGTTACACCCTCTCAACAAGAAAATCCTGATGTAAATATATCTCCAAAGTCGGTCATGAGCAATGGTGTTGAAGAAGATACTTTAGCTGATTCCAAGTCCATTAAAAAGCAAGAGGATGCTGACTGCTCTAATCACTCTGAAGGTTTGAATATATCTGGTCATGAAGCGTGTAATGATTTAGACCCTGAAAAAGTTGACAATAGTAAAAATAAGCCAGAACAATCTACCAAGAGACGACGGAAGAAATCAAGCTCTTCAACTAAATCTGCTAAACTTTCCAAGGGTCAAGTTGCTCCTAATGATAAGGAAACTGAGAAAATGCTCAACTATGAAAGCAACAGCAAGAAAGTACCCAGTTCTCCTCATGAGGACCATTTTGTTGAAGCAGCAGGACCTTCACAGAACAACAAAGAAATTGATGCTAAGACTTCATCACCAAAGGCATGCAACAATGAATCTGAAGTTGCTTCTCCACCAAGTGAGAGCCTCCATGATGAGAATCGATTAAAGAAACATGGACGAACAAAAAAGAAAGACGGCCCTATAAAATCTGTGGCTGGAGAGGATGTTTCCAAGGTGTCTGGAGGAGCTAGTGATTCAGAAGCCAGACCTGCTAGGCGGTCAATGAAAAAGGCACCCGGTCAGAACTCTGTGAAAAAAACTAGTGTTGTAGATTCAGTTAAAAAGGGAAGTGCGGCAGCAAATGACGCAGATGCTAAAAAGCACTCAGCGAAGAAATTAGATGAAAACAAAAAGGGTAGTGGTGGATCCTCTTCAAAGCAGATTGGGGACAAGAAAAAGGGAGGGAGGGTGAAAGCTAACTCTGAAACAGACCTTGCAAAATCAACTGCTATGGAAGTGGACAGGGAAGTGGTTTCTTCTCCGAGGTCTGGTACAAAATCAACTAAAGATGAAAGTTCAGAGGAGACTCCCAGGGCAAATGTGAAAAGGAAACGCACTTCAGGAAAAGAAAATGAGTCGGATGTGAAGGAATATGGTGAAAACCTTGTTGGTTCAAGGGTCAAAGTTTGGTGGCCTGAGGATCGTGAGTTTTACAAAGGTGTTATCCATTCTTTTTATTCTGGCAAAAAGAAGCACAAGGTCTTGTACGATGATGGTGATGAAGAAACATTAAATCTCGTGAAGGAAAAATGGAAGTTCATTGAAGCTGACTCAGATGCAGATGAGGAAGGACAAAGTGATCGTGAAAGTCTCGATGCTTCCACTGATATGCCACCGAAGAAGAAAGGGAAAACTAGTGTTGGCGAATCAACCAAGCAAGGAAAGGTGGATGATTCCTCCAAAAGCGGTGGAGCAGCAACACCCAGTAGATCAAAGGGTTCCATGAAGTCTAGCCAAAAGTCCAAAGATGGCAACAAATCCAAAGATTCCAAGACTATTAGCAAATCTGAGGACCGAGTTAGTAGAAAATCTAAGGACAGCACTCCTAAAAGTGGTAGCAGTAAACCTGTTGCAGCTGCTAAGAAAATGAGTAATAAATCCAAAAACCCTGATACTTCCAAGATTAGCGATTCAAAGGATGATGATACTAGCAAGCCAAAATCCGCTGCCAAGTCTAAGCAAGAAACTCAAAGAAGTGGGAAATCCAAGCAAGAAACCTTGAAGACTGCCATTTCCAGAGGAAAACCTCTTAAAAGTGGTGGAAAGAGTGATGTTAATGGTACTGGCAAGGTGAAATCCGGTTTATTGAAGAGAAAATATGCGGAGGATGAAAATTCAGATGCTTGA 2640 0.4129 MATTTTDKELEEQLLEAGNKLADPPSSVEELLSLLDQVESFLSRVEQSPSNSMQIALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITAPEAPYDDDQMKEVFQVIVSSFENLHDKLSRSYAKRTSILETVAKVRSCVVMLDLECDALILEMFQHFFKAIREHHPENVFSSMETIMTLVLEESEDISLDLLSTLLATVKKDDEEAFPIAKKLGERVLESCATKLKPYLVQAVKSLGIPMGDYSLVLSSICQDTSDTLEKNDTCVTSEHVEDKVDLAKQPREDSAHVDEKDPREVTPSQQENPDVNISPKSVMSNGVEEDTLADSKSIKKQEDADCSNHSEGLNISGHEACNDLDPEKVDNSKNKPEQSTKRRRKKSSSSTKSAKLSKGQVAPNDKETEKMLNYESNSKKVPSSPHEDHFVEAAGPSQNNKEIDAKTSSPKACNNESEVASPPSESLHDENRLKKHGRTKKKDGPIKSVAGEDVSKVSGGASDSEARPARRSMKKAPGQNSVKKTSVVDSVKKGSAAANDADAKKHSAKKLDENKKGSGGSSSKQIGDKKKGGRVKANSETDLAKSTAMEVDREVVSSPRSGTKSTKDESSEETPRANVKRKRTSGKENESDVKEYGENLVGSRVKVWWPEDREFYKGVIHSFYSGKKKHKVLYDDGDEETLNLVKEKWKFIEADSDADEEGQSDRESLDASTDMPPKKKGKTSVGESTKQGKVDDSSKSGGAATPSRSKGSMKSSQKSKDGNKSKDSKTISKSEDRVSRKSKDSTPKSGSSKPVAAAKKMSNKSKNPDTSKISDSKDDDTSKPKSAAKSKQETQRSGKSKQETLKTAISRGKPLKSGGKSDVNGTGKVKSGLLKRKYAEDENSDA* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0901 879 MobiDBLite consensus disorder prediction 531 550 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 803 833 - -
Pvu9g0901 879 Gene3D - 630 679 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 598 630 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 354 370 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 301 324 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 747 780 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 720 746 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 273 300 - -
Pvu9g0901 879 SUPERFAMILY ARM repeat 51 240 IPR016024 -
Pvu9g0901 879 CDD TUDOR 635 677 IPR002999 -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 273 630 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 325 340 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 781 802 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 686 879 - -
Pvu9g0901 879 SMART TUDOR_7 630 685 IPR002999 -
Pvu9g0901 879 Pfam Sister chromatid cohesion protein PDS5 protein 29 234 - -
Pvu9g0901 879 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 6 878 IPR039776 GO:0007064
Pvu9g0901 879 MobiDBLite consensus disorder prediction 698 719 - -
Pvu9g0901 879 PANTHER TRANSCRIPTIONAL REGULATOR 6 878 - -
Pvu9g0901 879 MobiDBLite consensus disorder prediction 433 455 - -
Pvu9g0901 879 SUPERFAMILY Tudor/PWWP/MBT 632 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0901 Pvu-Chr9 13706412 13720462 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0901 - - gmx:106794129 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0901 9 13706412 13720462 Pvu9g0901 9 13706412 13720462 ECH