Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0883 ATGTGGCCAGGAACAACGCACGAAACGTGCAAGTCTCTCTTTTTCTTCCTCCTTTTTGTTTATGCTACCTTCTTCTTATTCTTCTTCACTCTTCACTCTTCAATTCTGTTACATAACATGGCGTTGGTGAATCCATTTCTGTCTCCCACTCGAACTTTCCTCCCTTTGCGCGTTTCCGCGCCGCCAAAGAAGGTACTCCGTTGGGCTCTCTACTCCCCTTCTCTCAAACCATCGTTAAGATCGAAACACGCCTCGTGTGGCGCCACTGCAGACATCAAAGCTGCACCTTTAGCTGACAGTGAAGAAGATCGCGCAGTTCTTGTGGGTCCCACCAGCGAGAAGGAGGGGAAAGGGGAGTATGACTGGACGGAGGAATGGTACCCTTTGTATCTCACTCAGAATGTGCCCGAAGATGCACCCTTGGGGCTCACAGTGTTTGATAAACAACTTGTGTTGTTCAAGGATGGCAATAGCCAGTTCCGCTGTTACGAAGATCGCTGCCCCCACAGGTTAGCCAAACTGTCGGAGGGACAGTTGTTTGATGGAAGGCTTGAGTGTCTATACCATGGATGGCAATTTGAAGGGGAGGGCAAATGTGTGAAGATACCTCAGCTTCCGGCTGATGCCAAAATACCTAGGACAGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTGTGGATGTCCCTCAAGACACCTCCAAATGATAGTAAACTACCTTGGTTTGAGAACTTTGCAAGGCCGGGATTTCGAGACGTTTCAACAACTCATGAACTCCCTTACGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCTCATGTCCCAATTTCGCATGACAGAACGGATTGGACCGCAAAAAGGGAGAATGCTCAGCCGCTGGGTTTTGAGGTGACTGAGCGAACTGATAGAGGGTTTGCAGGTTGGTGGGGCACTGAGAAAGAGGGATCCAAGGGTAACTTCTTGCGGTTTGAGGCTCCATGTGTTCTACAAAATAACAAGGAATTTGTTGATAAGAATGGTGAAACAAACTACTTCAGTGGCCTGTTCCTTTGTAGACCAACTGGGCAAGGGAAATCCATGCTTATAGTGAGGTTTGGATCAACAAAATCATCTCCACTAGTAAAAGTGTTTCCAAAGTGGTACTTCCATCAGAATGCATGCAAGGTTTTTGAGCAAGACATGGGATTCTTATCATCTCAGAATGAAATTCTCTTGAAAGAGAAGGTTCCAACAAAGCAACTATATCTGAATCTGAAATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGTGGGGCATGGGATGCCATATTATTTTGGTCACAGCACTATCTCTTTGCCCAAAGAGCCTGCTGTGGTTGAACATGCACCTGCTGGACTCGTTGCAGGACAATCAGCTTCCTCACCGGCCAAGGGGGTTATTGGAACATTGCATGCCCCAAATTTAGCCAACAGATATTTTAGGCATGTGATACATTGCAAAGGATGTAGAACCGTTGTCAAAGCTTTCCAAGCTTGGCAAAATGCCCTTTCAGCTGTGGCAGTTACATTAGTCGCTTTGGCAATTCTGGTATCTGGGAAACAGTGGAAGGCCATTCTCTTGGCATCTGCTTCCCTGTGCTCTATAGGAGTCTATGCTTGCTCAACCGCCATTACAATGAACACTACAAACTTTGTTAGGACACATAGGAGATTGTGA 1731 0.4639 MWPGTTHETCKSLFFFLLFVYATFFLFFFTLHSSILLHNMALVNPFLSPTRTFLPLRVSAPPKKVLRWALYSPSLKPSLRSKHASCGATADIKAAPLADSEEDRAVLVGPTSEKEGKGEYDWTEEWYPLYLTQNVPEDAPLGLTVFDKQLVLFKDGNSQFRCYEDRCPHRLAKLSEGQLFDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRTACVKTYEVRDSQGVIWVWMSLKTPPNDSKLPWFENFARPGFRDVSTTHELPYDHSILLENLMDPAHVPISHDRTDWTAKRENAQPLGFEVTERTDRGFAGWWGTEKEGSKGNFLRFEAPCVLQNNKEFVDKNGETNYFSGLFLCRPTGQGKSMLIVRFGSTKSSPLVKVFPKWYFHQNACKVFEQDMGFLSSQNEILLKEKVPTKQLYLNLKSSDTWVAEYRKWMDKVGHGMPYYFGHSTISLPKEPAVVEHAPAGLVAGQSASSPAKGVIGTLHAPNLANRYFRHVIHCKGCRTVVKAFQAWQNALSAVAVTLVALAILVSGKQWKAILLASASLCSIGVYACSTAITMNTTNFVRTHRRL* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0883 576 SUPERFAMILY Bet v1-like 227 445 - -
Pvu9g0883 576 Pfam Pheophorbide a oxygenase 330 415 IPR013626 GO:0010277
Pvu9g0883 576 SUPERFAMILY ISP domain 119 239 IPR036922 GO:0051537
Pvu9g0883 576 Gene3D - 253 444 - -
Pvu9g0883 576 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 101 576 - -
Pvu9g0883 576 Pfam Rieske [2Fe-2S] domain 125 207 IPR017941 GO:0051537
Pvu9g0883 576 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 126 231 IPR017941 GO:0051537
Pvu9g0883 576 Gene3D - 121 250 IPR036922 GO:0051537
Pvu9g0883 576 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 101 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0883 Pvu-Chr9 13540316 13542591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0883 - - pvu:PHAVU_009G086000g 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0883 9 13540316 13542591 Pvu9g0883 9 13540316 13542591 ECH