Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0873 ATGAACAACTCTTTGCTTGCAGCTGCACAAGTTGGAGACATAGACCTGCTCTACAAACTGATTCAGATGCAACCCTATGTGTTGGAGCACACAGACTTCATGCCATTTGTTGATACTCCACTGCATGTTGCTGCTGCTGCAGGCCATGCCAGTTTTGCCACTGAGGTCATGAGACTCAAACCCTCCTTTGCATGGAAGCTGAACCAGTGTGGCCTTAGCCCCATGCATCTTGCTTTGCAGAACAAGCATCACAGAATGGTGTGTCGCTTTATGGAGATCAACAAGGACCTTGTTAGGATCAAAGGGAGGGAGGGTCTCACTCCTTTGCATATTGCAGCTCAAACTGGGAGAACTGATCTCGTGGCTAAGTTCTTATCGGCTTGTCCAGATTCCATTGAAGATGTAACTGTTCGAAGTGAGACCACGCTGCATATTGCTGTGAAACATAACCAGTTTCAGGTTTTGGAGGTCTTGGTTGGATGGCTTCAGAGAAACTGCCAAAGACATGCTAAGAACCGGGAGAAAAGGGTTCTGAACTGGCAGGATGAGGCAGGCAACACCGTTCTCCACCTTTCTGTTCTCAAAGTCCTCCCTCAGGCAGTTAAATTGTTGATAGATAGCAACATAGACATAAATGGCAAGAACTTTGAGGAATCAACTGCATTGGACATAGTTGAGATTAACCAAACCGAGGCACACAGTGCAGAAATCAGAGACATGCTAGTGAGAGGTGGAGCTTTACGTGGCTTTTCAGTTGCTACTACAACACTCGTGGAAGAGCTACGAACAAAAATCACATTCAACGAGAGAATAGCAATCTCAGTCACTCGCCTCAGAAAGAGAATATCAAACGACACACGCAATGCTTTGTTGGTGGTGGCCATTCTTTTCGCAACAAACACGTACGAAGCAGTGCGTAGCCCTCCTGGTGGAGTTTACCAAGGAGAGGGCAGTGCCATGAACTCTAAGAAGATCAGCACATCATTCAAGCACAGTGAGTATGCAGCAACGCAAGAAATTGGGAAAGTGGTGATGAAAATGCAAATATTCAATTGGTTCTGGTCCTTCAATACATTCTCCTGTTATCTTTCGATTTTGATGATATGTTTTCTCATGCCACGAGGGCGAATCAGTGTTTTCGTGACCTTACCACTTTCTATATTTTCTGGATGCTACGTGTTCTCCATGTTAGTGATATCACCCAGTTTCAGGTTAAACACTGCCACTGTGGTTCTGCCATGCGTCTTTACGCTGTTCTACTGTTGGGGAAGCTCCATATACTTTAGATTAGCCAAAAAACTTAAAATGTACGCTCATAAACAGAAAGACACGTTCAAGTTTGTGGGAGGAAACAGATGGTTATGA 1365 0.4484 MNNSLLAAAQVGDIDLLYKLIQMQPYVLEHTDFMPFVDTPLHVAAAAGHASFATEVMRLKPSFAWKLNQCGLSPMHLALQNKHHRMVCRFMEINKDLVRIKGREGLTPLHIAAQTGRTDLVAKFLSACPDSIEDVTVRSETTLHIAVKHNQFQVLEVLVGWLQRNCQRHAKNREKRVLNWQDEAGNTVLHLSVLKVLPQAVKLLIDSNIDINGKNFEESTALDIVEINQTEAHSAEIRDMLVRGGALRGFSVATTTLVEELRTKITFNERIAISVTRLRKRISNDTRNALLVVAILFATNTYEAVRSPPGGVYQGEGSAMNSKKISTSFKHSEYAATQEIGKVVMKMQIFNWFWSFNTFSCYLSILMICFLMPRGRISVFVTLPLSIFSGCYVFSMLVISPSFRLNTATVVLPCVFTLFYCWGSSIYFRLAKKLKMYAHKQKDTFKFVGGNRWL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0873 454 SMART ANK_2a 70 99 IPR002110 GO:0005515
Pvu9g0873 454 SMART ANK_2a 36 65 IPR002110 GO:0005515
Pvu9g0873 454 SMART ANK_2a 138 168 IPR002110 GO:0005515
Pvu9g0873 454 SMART ANK_2a 184 213 IPR002110 GO:0005515
Pvu9g0873 454 SMART ANK_2a 104 134 IPR002110 GO:0005515
Pvu9g0873 454 ProSiteProfiles Ankyrin repeat region circular profile. 104 125 - -
Pvu9g0873 454 PRINTS Ankyrin repeat signature 105 120 IPR002110 GO:0005515
Pvu9g0873 454 PRINTS Ankyrin repeat signature 200 214 IPR002110 GO:0005515
Pvu9g0873 454 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Pvu9g0873 454 PANTHER HOMEOBOX PROTEIN WARIAI 10 418 - -
Pvu9g0873 454 Gene3D - 1 252 IPR036770 -
Pvu9g0873 454 ProSiteProfiles Ankyrin repeat profile. 104 125 IPR002110 GO:0005515
Pvu9g0873 454 Pfam Domain of unknown function 284 403 IPR026961 -
Pvu9g0873 454 Pfam Ankyrin repeats (many copies) 178 224 IPR002110 GO:0005515
Pvu9g0873 454 Pfam Ankyrin repeats (3 copies) 75 159 IPR002110 GO:0005515
Pvu9g0873 454 PANTHER ANKYRIN REPEAT PROTEIN 10 418 - -
Pvu9g0873 454 SUPERFAMILY Ankyrin repeat 5 229 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0873 Pvu-Chr9 13447903 13449607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0873 4 428 Miscellaneous Gene Families AT5G15500 40.509 2.88e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0873 - - gmx:100790227 731.48