Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0870 ATGGTTCAATTTGGAAAACTTCATTCCCTTTTTCTGACGTCTGTGAATGACTGTTTGCCAATGGAATGTAATTATCAGTGTGGCCAAAGTGTTGTAAGCTTGAAGAGAAAGTTGCCAGAAGATGGAGATCATGTACTCTTCAACACCTTTTCTCTGGATGACCTTAATGAAGATCTCTTTGAAAGGATACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTAAATTCTGTGTGCAAAAGATGGAAATCAGTTGCTGATTCTGCCAGTTTCAAGCTTGCCTGCTCTCGCATTTCCTCGAGGGAGCCTTGGTTTTTAATGGTTGCTCCCAACCTTAATCAATCTGTTATCTTCGATTCTTCTGAGAGCTCTTGGAAGAGACTAAACCACCCACCTCTTCTGCAAGAGGAATCTAACCAAAATTGCATGCCAGTTGCAGCCTCTGGTGGCTTGATTTGCCACCGAAAATCATCTGGAAACTTCATTGTGAGCAACCCCGTGACAGGATCTTGTACAGAACTCCCCCCACTTCATGCCCCACAGCACCAACCTCTCAATGCCATTGTGATGAGCACAGCTTGCAAAGACCAACTCTCCTTCAAAATTGTCTTAGTCTTTGGTGAACTTCCAAATCTCTTGTTTAAAGTCTACGATTCAAGATCTGGCTGTTGGGATGATGAGATTGCTTTGAGGAGAAAGACAGAAGACAATTCAATGGAACATGATTCTACTGATGACAATGTTGTGTACTTCCTCAGCAAGGCTGGAATTGTTGTGGCAAGCAACATGCAGAGAAGCCCCTCTAAGCAGTATTCATCAGTTATTACCAACAAAGATGGGCAAGATATTGTGTATTTTCTTAGCTCCTCAGGAAACGTAGTAGCTTGCAATTTGACTTGCAAGTGCTTCTTTGAGTACCCCAGGCTGTTGCCTGTTTTTAGTGAGTATTCCATTGATGTTGTAGAGTGCAGTGGGGAGATGCTAGTTGTTTTGTTATCAGAGTTCTTGGAAACTGCAACTCTTAGGGTGTGGAGGTATGATGAGGCTAATAAAGGGTGGCATCAGATTGCCGCAATGCCTGCAGCAAATTCTCATGAGTGGTATGGAAAGAAAGCAGATATTAACTGTGTTGGGGCTGGTAACCAAATATTGATATGCTTGAGCTCCCCTGATCTATGCACTTATGTTATGTGTGATTTGGAAACCAACAAGTGGGTTGAATTGCCAAAATGTTGCATAAATGGTGAAGTCATAGACTTTATGTCTGCCTTTTCATTTGAGCCTCGGATAGAGGCTTCTGTATGA 1305 0.4253 MVQFGKLHSLFLTSVNDCLPMECNYQCGQSVVSLKRKLPEDGDHVLFNTFSLDDLNEDLFERILSWLPTSTFFRLNSVCKRWKSVADSASFKLACSRISSREPWFLMVAPNLNQSVIFDSSESSWKRLNHPPLLQEESNQNCMPVAASGGLICHRKSSGNFIVSNPVTGSCTELPPLHAPQHQPLNAIVMSTACKDQLSFKIVLVFGELPNLLFKVYDSRSGCWDDEIALRRKTEDNSMEHDSTDDNVVYFLSKAGIVVASNMQRSPSKQYSSVITNKDGQDIVYFLSSSGNVVACNLTCKCFFEYPRLLPVFSEYSIDVVECSGEMLVVLLSEFLETATLRVWRYDEANKGWHQIAAMPAANSHEWYGKKADINCVGAGNQILICLSSPDLCTYVMCDLETNKWVELPKCCINGEVIDFMSAFSFEPRIEASV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0870 434 Gene3D - 48 104 - -
Pvu9g0870 434 ProSiteProfiles F-box domain profile. 49 94 IPR001810 GO:0005515
Pvu9g0870 434 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 44 434 - -
Pvu9g0870 434 SUPERFAMILY Galactose oxidase, central domain 115 412 IPR011043 -
Pvu9g0870 434 SUPERFAMILY F-box domain 49 107 IPR036047 GO:0005515
Pvu9g0870 434 Pfam F-box domain 52 92 IPR001810 GO:0005515
Pvu9g0870 434 SMART fbox_2 55 95 IPR001810 GO:0005515
Pvu9g0870 434 Gene3D - 105 424 IPR015915 GO:0005515
Pvu9g0870 434 PANTHER F-BOX/KELCH-REPEAT PROTEIN 44 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0870 Pvu-Chr9 13401204 13403584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0870 - - gmx:100786481 736.487