Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0866 ATGATTTCCACAATGAATTGGGACGAGAACGATGAATTTGAGATCCCTCTTACTCAAACGGCAACGAGTTTTCACGCGCTCGCTTCTATCGATGACAATCAACGGCCGCCGAAGAAACCTAAACGCAAAACGACGGCGCATCGTGGCAGTGGCAAGGAGAACGTCCGACCCAGCGAGTCTTGTGAAATTGAGAACTGCAGCTTGGATTTCATCCCTTCCACCATAGATTGTGGTTCGGTTTGCAGCGTTCAACGCTCGGAACAAGAAGACAGTGATTCTTCTTCCGCATCTTTGTCGGAGCTGGATCAAAAGGGGAATTATCTTCGCAACTCGATAGAGTCGAAGCTGGTGGTTTCGACAACCGGCGCGCTTAACGCTGCAGATGCAGATTCTGATTCGGAGCTTGGTCTGTTGATGAATCTGTGCGACGAGTTGGAGGAAGTAGATAGTTCCGTTCGGTGTCCCCTGTGTGACGTTGATATTTCGAATTTGACCGAGGAACAGCGACATCTTCATACCAATAATTGTCTTGACGAAGGAGATAACGTTGCGGTTCTTGAAGACGAGAAGGGTGCTCAACATGTGCCAAAAGTCGCTTCTGTTGTTGATTGGCTTCACGGGCTCGGTTTGGGAAAGTATGAAGTGGTTTTCATTAGGGAAGAAGTTGATTGGAACACCTTGCAATGCCTCACAGAAGAGGATCTCTTAAGCATGGGTATCACTGCACTTGGGCCCAGAAAGAAGATAGTTCATGCCCTGCGTGAACTAAGAAACGGAGATGCCGCTATAAATGAGAAACAAGAGGATGCGTTGGAGGAGCCTAGAAGGATTAGAAACCAGAAAGTCAAATTAAAGCATGACAAATCTGAAAGAAAAGCTGATGGCTCTATTAAACCAGTGGCAAACAAATTAATTACTGAATATTTTCCGGGGTTTGCTTCCAAGGAAAAGAAAGTTTTTGCCTCTCCTGGAGAACAGAAGGAAATGAAAAACAGTGGCTTGGATTCTGGCCGTAAGCGCAAATCAAAAAATGTGACTGCAAATAGAAAGCTCCGTGATGTTCCCAAATGGTGTTCTGTACAAGGAACGCCTTTTCGAGTGGATGCTTTCAAATATCTCAGAGGAGATTGTTCCCACTGGTTTCTAACACACTTCCACTTGGACCATTATCAAGGTCTTACCAAGTCATTCAATCATGGAAAGATTTATTGCTCCTCCATTACAGCTAGACTAGTAAATACGAACATTGGAATTCCATATGATAAATTACATGTTTTGCCTCTGAACCAAAAGATTGAAGTAGCTGGTGTTGATGTGACTTGCTTTGATGCCAACCATTGTCCAGGTTCCATACTCATACTCTTTCAACCTCCAAATGGTAAGGCTGTGCTGCACACGGGTGATTTCCGGTTTAGTGAGGAAATGACAATCAATCCTTTACTCAAGACGTGTCCTATCAATACTCTAATTCTTGATACGACATACTGCAATCCACAGTATGACTTTCCAAAACAAGAGGCTGTAATACAATTCGTTATTGATGCCATTCAAGCAGAAACTTTTAATCCCAAGACTCTTTTTCTGATCGGCAGTTATACCATTGGAAAAGAAAGGATATTCTTGGAGGTTGCTCGTGCGCTCAGTAAAAAGGTTCACGTGACTGCGGCAAAGTTGCGTCTTTTAAAATGTTTGGAATTTAAGGAGGAGGATATGAAGTGGTTCACTTCAAATGAACATGAAAGCAACATTCATGTTGCCCCTATGTGGACTCTCGCAAGCTTCAAAAGATTGAAGCAAATGTCTAGTCAATATACGGGTCGGTACAATCTTATAGTTGCTTTCTCCCCCAGTGGTTGGACGTTTGGCAAAGGTAAAAAGAAGTCTTCCGGAAGAAGATGTCAGCAGGGTACTATTATAAGGTATGAAGTACCTTACAGTGAACATAGCAGCTTTACAGAACTCAAAGAGTTTGTAAAACTTGTATCTCCTGGTAACATTATACCAAGTGTGAATAACGATGGACCAGAATCTTCGGATGCAATGATTTCTCTATTGTTATCTTGA 2064 0.4293 MISTMNWDENDEFEIPLTQTATSFHALASIDDNQRPPKKPKRKTTAHRGSGKENVRPSESCEIENCSLDFIPSTIDCGSVCSVQRSEQEDSDSSSASLSELDQKGNYLRNSIESKLVVSTTGALNAADADSDSELGLLMNLCDELEEVDSSVRCPLCDVDISNLTEEQRHLHTNNCLDEGDNVAVLEDEKGAQHVPKVASVVDWLHGLGLGKYEVVFIREEVDWNTLQCLTEEDLLSMGITALGPRKKIVHALRELRNGDAAINEKQEDALEEPRRIRNQKVKLKHDKSERKADGSIKPVANKLITEYFPGFASKEKKVFASPGEQKEMKNSGLDSGRKRKSKNVTANRKLRDVPKWCSVQGTPFRVDAFKYLRGDCSHWFLTHFHLDHYQGLTKSFNHGKIYCSSITARLVNTNIGIPYDKLHVLPLNQKIEVAGVDVTCFDANHCPGSILILFQPPNGKAVLHTGDFRFSEEMTINPLLKTCPINTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAETFNPKTLFLIGSYTIGKERIFLEVARALSKKVHVTAAKLRLLKCLEFKEEDMKWFTSNEHESNIHVAPMWTLASFKRLKQMSSQYTGRYNLIVAFSPSGWTFGKGKKKSSGRRCQQGTIIRYEVPYSEHSSFTELKEFVKLVSPGNIIPSVNNDGPESSDAMISLLLS* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0866 687 Pfam SAM domain (Sterile alpha motif) 197 257 IPR001660 GO:0005515
Pvu9g0866 687 SMART SAM_4 193 259 IPR001660 GO:0005515
Pvu9g0866 687 Pfam DNA repair metallo-beta-lactamase 569 673 IPR011084 -
Pvu9g0866 687 MobiDBLite consensus disorder prediction 331 346 - -
Pvu9g0866 687 MobiDBLite consensus disorder prediction 27 58 - -
Pvu9g0866 687 Gene3D - 361 670 IPR036866 -
Pvu9g0866 687 Gene3D - 193 268 IPR013761 -
Pvu9g0866 687 ProSiteProfiles SAM domain profile. 196 259 IPR001660 GO:0005515
Pvu9g0866 687 Pfam Beta-lactamase superfamily domain 381 500 IPR001279 -
Pvu9g0866 687 Gene3D - 501 648 - -
Pvu9g0866 687 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 152 683 - -
Pvu9g0866 687 SUPERFAMILY Metallo-hydrolase/oxidoreductase 365 669 IPR036866 -
Pvu9g0866 687 CDD SAM_superfamily 200 255 - -
Pvu9g0866 687 PANTHER DNA CROSS-LINK REPAIR 1A PROTEIN 152 683 - -
Pvu9g0866 687 SUPERFAMILY SAM/Pointed domain 197 258 IPR013761 -
Pvu9g0866 687 CDD SNM1A-1C-like_MBL-fold 341 498 - -
Pvu9g0866 687 MobiDBLite consensus disorder prediction 320 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0866 Pvu-Chr9 13307220 13315590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0866 199 253 Glycosyltransferase AT3G07170 47.273 2.48e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0866 K15340 - gmx:100816321 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0866 9 13307220 13315590 Pvu9g0866 9 13307220 13315590 ECH