Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0865 ATGGCAGCTCAAGACAAGTGGTGCGTGGTGACCGGAGGTAGGGGTTTCGCCGCTCGGCATTTGGTGGAAATGTTAATCCGGCACAACCAATACTGCGTTCGCATCGCCGATTTGGAAGACAACATTTCTCTCGAGCCCGCCGAACAGCTGGGGCTTCTCGGCCAGGCCTTGCACTCTGGCCGGGCCCAATACGTCTCCCTCGATCTCCGCAACAAGGCCCAAGTCCTAAAAGCATTAGAAGGAGTTGAGGTTGTTTTCCACATGGCTGCTCCAAACTCTTCCATTAACAATTACAAGCTTCATTATTCCGTTAATGTGCAAGGGACAAAGAATGTCATCGATGCTTGCGTGGAGCAAAAGGTGAAGCGACTCGTTTACACCAGCTCTCCCAGCGTGGTTTTTGATGGCGTTCATGGGATTCATAATGGTGACGAAACAATGCCTTATACACCTTCGCATAATGATCATTACTCAGCTACGAAAGCTGAGGGTGAGACATTGGTTATGAAAGCTAATGGGACTAATGGGCTCCTAACGTGCTGCATACGCCCCAGCAGCATTTTTGGGCCCGGTGATAGACTGTTGGTGCCTACACTAGTTGATACTGCCAGAAAAGGGAAATCCAAGTTCCTTATTGGCGATGGTAATAACGTCTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGAACGAGCTCTGGATTCAGAAGGGCCAGTTTCAGAAAAAGCTGCTGGAGAGGCATATTTCATAACAAATATGGAGCCTATGAAATTTTGGGAGTTTGTGTCAGTGGTATTGGATGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTGCTGCTGTTATCTTGCCCATTGCGCATTTGGTGGAGTGGATATATAGGCTGCTTGGCCCATATGGGATGAAGGTGCCTCAGTTAACCCCTTCAAGGATAAGACTCACGACCTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGATCGTCTTGGCTATGCACCCATCGTGACAATGCAGGAGGGCCTGCAGAGGACAATTGAATCATATGCACACTTGAAGGCAGAAAATCTACCTAAAACTAAAAGAGAAGGTCCCTCAAAAGCTTCCAAATATCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAAGAAGCAAACTCTCATCACCTTGTTAGTCTTGATTGCAATATATTTCAACTTCATTGCATCAGAAAATACCATCATCAGTGCTCTGACAAAGCTTCTATTGTTCGCATCTATCTTTTTATTCATTCATGGCATTCTACCTGCAAAAATGTTGGGGTATACTGTTGAGAAAATGCCAAAATCATGGTTTCACTTGTCAGAAGATATGTCACGTAAATTTGCTCTCTCAGTGGCCTCGTTATGGAATATTGCTGTGAATGTTTTGAAGTCCCTTGCAGAAGGGAATGATTGGGTGCTATTATTAAAGGTTGTTGTCTCTCTGTTCGTTCTTAGTTTCCTTGGAGCCTTCTCACTTCAGAACTTGTATACTATAGGAGTTACATTTGCATTTATAGCTTTCTACGTGTACGAACTGAAGGAGGAAGACATTGATGGCATATTTATAAAAACACATTCTTTTAGTAGCAAATTGAAATCTGATCTCACCAAAAAGTTTCTTTCTTCAAAGAAGATTGATTGA 1689 0.4364 MAAQDKWCVVTGGRGFAARHLVEMLIRHNQYCVRIADLEDNISLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQVLKALEGVEVVFHMAAPNSSINNYKLHYSVNVQGTKNVIDACVEQKVKRLVYTSSPSVVFDGVHGIHNGDETMPYTPSHNDHYSATKAEGETLVMKANGTNGLLTCCIRPSSIFGPGDRLLVPTLVDTARKGKSKFLIGDGNNVYDFTYVENVAHAHICAERALDSEGPVSEKAAGEAYFITNMEPMKFWEFVSVVLDGLGYERPRIKIPAAVILPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLTTCSRTFDCSKAKDRLGYAPIVTMQEGLQRTIESYAHLKAENLPKTKREGPSKASKYLGSGRVADTLLWKDKKQTLITLLVLIAIYFNFIASENTIISALTKLLLFASIFLFIHGILPAKMLGYTVEKMPKSWFHLSEDMSRKFALSVASLWNIAVNVLKSLAEGNDWVLLLKVVVSLFVLSFLGAFSLQNLYTIGVTFAFIAFYVYELKEEDIDGIFIKTHSFSSKLKSDLTKKFLSSKKID* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0865 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 355 IPR036291 -
Pvu9g0865 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Pvu9g0865 562 Gene3D - 1 359 - -
Pvu9g0865 562 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 385 - -
Pvu9g0865 562 Pfam Reticulon 382 537 IPR003388 -
Pvu9g0865 562 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 4 385 - -
Pvu9g0865 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0865 Pvu-Chr9 13297872 13303865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0865 9 371 Lipid Metabolism Gene Families AT2G33630 32.283 3.71e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0865 K23558 - gmx:100799363 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0865 9 13297872 13303865 Pvu9g0865 9 13297872 13303865 ECH