Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0858 ATGAACTTATCCAAGAAAGGATCCCAAACGGATGCAAAGCTATTAAGCCCAAACAAGGCAACAACTCTGAATCCAAATGCAGCAGAGTTTATTCCTCTTGCCCTCAGATCATCATCATTATCTGGAACTACCATCTCGGTAGATGCAACAGCAGGGCTTCCCGCTGCTGGAGCTCTTGGGAAAGCAATTTTAGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTGCATCAATTCTGGCGATGTCAGCTCCCTGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAATCTCAAGGTCTAGACGATCTTCCTTTAGCAGGTTTATCCATTCTTGAGGACAGTGAGGCCTCCAGGTTTCCTTCTTCCAAAGGAAGTAAATATATAATAAACGAGCAGGAGGAAATATCTCAACCGCATAATAATGGCAATAGCTTTGCAGATAAAATGGGATTTTCCCATTCAAGCTACAGGGAGGACCCGTCTTCAACAAGCTTTTTGAATGCTATGGCAAAGCCTTGGGAGGGGTCAATTGGGAGTGCTGACCAGCGTATTAGCAGTGGTCAAGAGGGGTTTGCTTATGATGACAACACTAGACATGGATACTTAAATGATGTTTTGGCTGAAAATGCAATTATGGATGATACTGATTTGAATCCTTTGGAGTTTTTAGCTTCTCTGTTCCCTGGTTTTGCAGCAGAAAGCCTCGCAGAAGCTTACTTTGCCAATGGATGTGATTTACATATGACCACTGAGATGCTCAGTCAGTTAGAGCTTCAAGTTGATGGTGGTTTCAATCAAAATCTGAATTCAAAGACTCTGTCAGCTCCCAATCTCAGTGCAATGGAGTTTCCTGCACTTACTTCACCAGATGGCCAGGCTGCTTCAGTTAAATATGTGGTTGACAATGTCCAGCAAAGTGGAAATCTTTACCAGTCATTTGACAGTGATGTTATGCTTTTCAAATCTAGCTCTTCAATTCCATCTAGAGGTGCTGTTGACTTTGCTTCCGCTGTTAGAAAGTTGGCTTCTCAGGATTCTGGTGGTATTTGGAAGTATGACAAGAATGGCTCTGGTGATGCTGCTATAGGTTCAAGTAGGAATTCAAATGTTTTGGGTAGTGGCTACAATGGTGTACAGGCGAGAGCACACTTTGGTGATCGATTGCAGAACCGTGGTTCAGCTCGAGCAGCTCCTATTTGGCTTGAAACCGGTGATGCCGTTGCGAATATGTATTCAGAGCTGCGGGAAGAGGCTCGTGATCATGCATGCTTACGCAATGCATATTTTGAGCAGGCTCGTCAAGCTTATCTTATCGGTAATAAAGCCCTAGCAAAGGAACTAAGTGCTAAAGGGCAACTTCACAACATGCATATGAAGGCAGCTCACGGAAAAGCTCAAGAATCCATTTACCGTCAGAGAAATCAAGTTGCTTCAGAGATGCAGGGCAATGGAAGAGGACACGAGAGGATAATAGACCTACATGGGTTGCATGCGAGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTGAAAAGCACTGCCATAGCTGCTGAGCAGCGTTTGCAGGTGTATATTTGTGTGGGCACAGGTCATCACACTAGGGGTTCCCGCACTCCTGCAAGACTTCCAATAGCTGTACAGCGTTTTCTTCTTGAAGAGGGCATTGATTTCACGGAACCTCAGCCAGGCCTACTTCGCGTTGTGATATATTGA 1737 0.4421 MNLSKKGSQTDAKLLSPNKATTLNPNAAEFIPLALRSSSLSGTTISVDATAGLPAAGALGKAILDRSESSISNNSDDEVHQFWRCQLPDDITPDFKVMGEDESQGLDDLPLAGLSILEDSEASRFPSSKGSKYIINEQEEISQPHNNGNSFADKMGFSHSSYREDPSSTSFLNAMAKPWEGSIGSADQRISSGQEGFAYDDNTRHGYLNDVLAENAIMDDTDLNPLEFLASLFPGFAAESLAEAYFANGCDLHMTTEMLSQLELQVDGGFNQNLNSKTLSAPNLSAMEFPALTSPDGQAASVKYVVDNVQQSGNLYQSFDSDVMLFKSSSSIPSRGAVDFASAVRKLASQDSGGIWKYDKNGSGDAAIGSSRNSNVLGSGYNGVQARAHFGDRLQNRGSARAAPIWLETGDAVANMYSELREEARDHACLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKAAHGKAQESIYRQRNQVASEMQGNGRGHERIIDLHGLHASEAIHVLKHELSVLKSTAIAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGIDFTEPQPGLLRVVIY* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0858 578 SMART DUF1771_2 416 481 IPR013899 -
Pvu9g0858 578 ProSiteProfiles Smr domain profile. 497 578 IPR002625 -
Pvu9g0858 578 SMART SMR_2 494 578 IPR002625 -
Pvu9g0858 578 CDD CUE_CID7_like 223 265 IPR041806 -
Pvu9g0858 578 SUPERFAMILY SMR domain-like 495 576 IPR036063 -
Pvu9g0858 578 MobiDBLite consensus disorder prediction 1 20 - -
Pvu9g0858 578 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 578 - -
Pvu9g0858 578 Pfam Domain of unknown function (DUF1771) 417 480 IPR013899 -
Pvu9g0858 578 Gene3D - 464 577 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0858 Pvu-Chr9 13234137 13240634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0858 - - vun:114164614 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0858 9 13234137 13240634 Pvu9g0858 9 13234137 13240634 ECH