Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0850 ATGGGTAATAGACAAGTATATTTGGCCATCATTCTAGCATGGCTAACTTTGTTTGAAGGAAATATGATGGTTGTCAGTGGTGGTGGTGGTGGTGGTGGTGGTAGGGGTGGTGGTGGTAGCGGTGGTGGTGGTGGTAGGGGTGGTGGTGGTAGCGGTGGCGGTGGTGGTGGTGGTGGTAGTGGTGGTGGTGGTGGTAGGGGTGGTGGTGGTGGTGGTGGTGGTTTGAATTACAAGGAGGCTCTCACCAAGTCCCTTATCTTCCTTGAGGCACAACGTTCAGGGAAACTTCCCAAAAATAATAGGGTGCCCTGGAGAGGAGACTCAGCACTCGATGATGGAAAACTCGTTAACATGGACCTTGTTGGAGGATACTATGATGCAGGGGACAATGTGAAATATGGTCTCCCCATGGCTTTCACCGTTACTACGCTAGCATGGGCTGCTATTGCTTACAATTCAGAGTTTAAATCAGCACAAGAGTTGAATAATCTTCACGCTGCCATTCGTTGGGGTACTGATTATTTCCTCAAAGCTACTTCTCGAAGCAAAACATTATACGTAGAGGTAGGGGACCCAAATAAGGATCACAAGTGTTGGATCTCACCAGAACGTATGAAGATAAAGAGAATGGTTAAGATGATTGGTGAAGGCACGGCCGGGAGTGAAATTGCAGCAGAAACTGCAGCTGCAATGGCAGCTTCTTCCATTGTTTTTGGAACCACAGATCGTCCATATTCCCGTAATCTTCTCAACAAAGCTAAATTGCTTTTCGATATGGCCAAAGCGAACAAAGGAACCTATGATGGAGAATGTCCCTTCTACTGCTCTTATTCCGGCTTCAATGACGAATTGATGTGGGCAGCAACATGGCTATACATGGCTACGAAGAGTTCAATGTATATCAAGTTCGTATTAGAAGAATCCAAGAGTGCTTCTGTAGCAGAATTTAGTTGGGACCTTAAATATGCTGGAGCTCAAATCCTTCTTAGCCAGTTATTTTTCGAAGGTGAACAGAAGTTGGAGAGATTCAAAAAACAAGCAGATAGTTTCATATGCTCTGTCCTTCCTGATAGTCCCTACAGCCAGGTTAAATTGACTCCTGGTGGCTATATTCATTTAAGAGACGGAGCCAACTCGCAGTATGCAACCAGTGCAGCTTACTTGTTCAGTGTATATAGTGACTTGCTTGCCAAATATAAAGGCAAAGTTGTTTGTGGGGACAAAACGTTTGGTGCTCCACGTCTCCTTGCTTTTGCTAAGAAACAAATGGATTACCTTCTAGGGAAAAACCCGGAAGGAAGATCTTACATGGTAGGATTTGGAAAAAACCCACCAACACAAGCTCACCATAGAGGAGCTTCGGTGCCGGCATTGAAAAAGGGTGAAGAAGAAGTGAATTGTGGGATGAGCTTCGTAAAATGGTTTAAGAAAGATGAACCTAACATCCATGAACTCACTGGTGCCATTGTGGGTGGACCTGACATCGGTGACAAGTTCAAAGACAAACGTTGGGAGTCACCCTACACTGAACCATGCACCTACGTCAATTCCCTCGCTGCTGGAGTTCTAGCTAAGCTTGCATCTATGTATTGA 1593 0.4532 MGNRQVYLAIILAWLTLFEGNMMVVSGGGGGGGGRGGGGSGGGGGRGGGGSGGGGGGGGSGGGGGRGGGGGGGGLNYKEALTKSLIFLEAQRSGKLPKNNRVPWRGDSALDDGKLVNMDLVGGYYDAGDNVKYGLPMAFTVTTLAWAAIAYNSEFKSAQELNNLHAAIRWGTDYFLKATSRSKTLYVEVGDPNKDHKCWISPERMKIKRMVKMIGEGTAGSEIAAETAAAMAASSIVFGTTDRPYSRNLLNKAKLLFDMAKANKGTYDGECPFYCSYSGFNDELMWAATWLYMATKSSMYIKFVLEESKSASVAEFSWDLKYAGAQILLSQLFFEGEQKLERFKKQADSFICSVLPDSPYSQVKLTPGGYIHLRDGANSQYATSAAYLFSVYSDLLAKYKGKVVCGDKTFGAPRLLAFAKKQMDYLLGKNPEGRSYMVGFGKNPPTQAHHRGASVPALKKGEEEVNCGMSFVKWFKKDEPNIHELTGAIVGGPDIGDKFKDKRWESPYTEPCTYVNSLAAGVLAKLASMY* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0850 530 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 425 451 IPR018221 -
Pvu9g0850 530 SUPERFAMILY Six-hairpin glycosidases 76 528 IPR008928 GO:0005975
Pvu9g0850 530 Pfam Glycosyl hydrolase family 9 77 523 IPR001701 GO:0004553|GO:0005975
Pvu9g0850 530 PANTHER ENDO-1,4-BETA-GLUCANASE 74 527 - -
Pvu9g0850 530 Gene3D - 73 530 IPR012341 GO:0005975
Pvu9g0850 530 PANTHER ENDOGLUCANASE 16-RELATED 74 527 - -
Pvu9g0850 530 MobiDBLite consensus disorder prediction 31 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0850 Pvu-Chr9 13181621 13184523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0850 71 528 Glycoside Hydrolase AT3G43860 67.686 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0850 K01179 - gmx:100810971 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0850 9 13181621 13184523 Pvu9g0850 9 13181621 13184523 ECH