Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0841 ATGGAGAGGTTTTCGTCTCACCGGCGTCGTTCCGATGGAGAGAGTACTTCCGCTTCATCCGAGGACAATCGCCGGAAGCGCATCAGAGTTTATTTTGATTTCGATGGCGTTCATTCTACCATTGCGAGTTCTTCGAATTCTGGGAAATCCAGTGCATCTGCCGAGTATGGTGATTATACTGATCTTCAAGGATCGTCTCTTCGATCCAACGATGATGCTTTGAGGTTGATGTCTTCTGGCGAGGAGAGTAACTTTGATGAAGGAGATGACAGTGACATCGCAAATGTAGATGATCTAGTAGCCAAGATGGATCTTACGGATGATTTATTGCACATGGTTTTCTCCTTTTTGGATCACTCCAATCTCTGCAAAGCTGCCAGGGTTTGTAAGCAGTGGCGTACTGCTAGTGCTCATGAAGACTTTTGGAAGAGTTTGAATTTTGAAGATCGTAACATATCTGTTGAGCAATTCGAGGACATCTGTAGGCGTTATCCTAAAATCACAACAATCCGCTTGTCCGGTCCTCCATCTTACCAGCTTGTCATGAAGGCCGTCTCTTCGTTAAGAAATCTTGAGGCTTTAACATTGGGAAGAGGAAATATAATGGATAGCTTTTTCCATGCTTTGGCTGATTGTTCTATGTTGAGGAAACTGAGCATCAATGATGCTATACTTGGCAGTGGTATTCAGGAAATATCAGTTAATCACGACAGACTGTGTCATCTCCAGTTGACAAAGTGCCGTGTGATGCGAATAGCAGTCAGGTGCCCACAACTTGAAACCATGTCCTTGAAGCGCAGTAACATGGCTCAGACTGTACTCAACTGCCCCCTTTTGCAAGAGCTTGATATAGGGTCTTGCCACAAACTTCCTGATTCTGCTATTCGATCGGCTGTTACATCATGCCCGCAATTAGTTTCTTTGGACATGTCTAATTGTTCATGTGTTAGTGATGAAACATTAAGGGAAATAGCCCAGAATTGTGCTAACCTTAGTTTCCTTGATGCATCATACTGCCCAAATGTATCCTTGGAGACTGTTCGACTGCCAATGTTAACAGTTCTGAAGCTTCACAGTTGTGAGGGCATCACTTCAGCTTCAATGGCTGCAATAGCTTATAGTTACATGTTGGAGGTTTTGGAGCTTGATAATTGTAGCCTATTGACATCAGTGTCTTTAGATCTTCCTCGCTTGCAGAACATTAGATTGGTTCATTGTCGCAAATTTTCCGATTTGAACTTGATGACCCTGATGCTGTCTTCTATTTTGGTGTCCAATTGTCCTGTGCTCCATCGTATAAACATCACATCAAATTCACTTCAAAAATTAACTATACCAAAGCAGGACAGCTTAACCACATTGGCTTTGCAATGCCAATCTTTGCAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGAATAATTCTGTATGCAATGTTTTTAATGATGGTGGAGGCTGTCCAGTGTTGAAATCGTTAGTTCTTGATAATTGTGAGAGTTTGACATCAGTTCAATTCATCAGTACCTCTTTGATCTGTCTCTCGCTTGGTGGTTGCCGGGCAATAACTAATCTTGATCTCACATGCCCTAATCTGGAGAAACTTGTTTTGGATGGCTGTGATCATTTGGAAAGAGCGTCATTTTGTCCAGTTGGTCTTTCATCCCTCAATTTAGGAATATGTCCTAAATTAAGCACACTCAGAATCGAAGCACCTTATATGGTGTCACTTGAGTTGAAAGGATGTGGTGTACTATCTGAAGCGTTCATTAATTGTCCACTCTTAACATCTCTAGATGCCTCCTTTTGCAGCCAACTAACTGATGACTGCTTGTCTGCTACAACTGTCTCATGCCCACTGATTGAATCATTGATATTGATGTCATGCCCATCAATTGGTTCAGCGGGTCTTCGATCTTTATATTGTCTTCCAAATTTGACTGTTCTTGACTTATCATACACTTTCTTGGTGAACTTGCAGCCTGTTTTTGATTCTTGTTTACAGCTAAAGGTGTTAAAGCTGCAAGCATGCAAATATCTCACTGAAACATCACTTGAACCTCTTTACAAAGGAGGGGCTTTACCAGCACTTCAGGAGTTGGACTTGTCTTACGGAACTTTCTGTCAGTCAGCCATAGATGAGCTTCTTGCTTGCTGCACAAACCTCACTCATGTGAGCTTGAATGGCTGTTTGAATATGCATGATTTGAATTGGGGATGCAGTTGTGGGCAGAGTAAGAATTTGCCTGCTGTAAACACCCTATACAGGGCAAGTTCTAATGAGAATGTTCCCGAATCAAGTGAGCAATCCCCTCGCTTGTTGCAAAACCTAAATTGTGTTGGGTGTCCAAATATTAGGAAGGTTGTCATTCCATTGAGGGCAAATTGTTGTCATTTGTTAATTTTAAACCTTTCGCTGTCTGCAAATTTGAAAGAGGTTGATGTTACTTGTCTCAACCTATGCTTTCTTAATTTAAGCAATTGTTCCTCTTTGGAAATTTTGAAGCTAGAGTGTCCAAGATTGACTAGTCTATTCCTTCAGTCTTGCAATGTTGACGAGGAAGCTGTTGAAGTTGCTATATCAAAATGCACTATATTGGAGACTCTTGATGTTCGCTTTTGTCCAAAGATAAGCTCAATGAGCATGGGAAGATTACGCACAATTTGTTCAAGTTTGAAGCGTATATTCAGCAGTTCGTCAACTTTGTTGCCTTGA 2712 0.4148 MERFSSHRRRSDGESTSASSEDNRRKRIRVYFDFDGVHSTIASSSNSGKSSASAEYGDYTDLQGSSLRSNDDALRLMSSGEESNFDEGDDSDIANVDDLVAKMDLTDDLLHMVFSFLDHSNLCKAARVCKQWRTASAHEDFWKSLNFEDRNISVEQFEDICRRYPKITTIRLSGPPSYQLVMKAVSSLRNLEALTLGRGNIMDSFFHALADCSMLRKLSINDAILGSGIQEISVNHDRLCHLQLTKCRVMRIAVRCPQLETMSLKRSNMAQTVLNCPLLQELDIGSCHKLPDSAIRSAVTSCPQLVSLDMSNCSCVSDETLREIAQNCANLSFLDASYCPNVSLETVRLPMLTVLKLHSCEGITSASMAAIAYSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFSDLNLMTLMLSSILVSNCPVLHRINITSNSLQKLTIPKQDSLTTLALQCQSLQEVDLSECESLNNSVCNVFNDGGGCPVLKSLVLDNCESLTSVQFISTSLICLSLGGCRAITNLDLTCPNLEKLVLDGCDHLERASFCPVGLSSLNLGICPKLSTLRIEAPYMVSLELKGCGVLSEAFINCPLLTSLDASFCSQLTDDCLSATTVSCPLIESLILMSCPSIGSAGLRSLYCLPNLTVLDLSYTFLVNLQPVFDSCLQLKVLKLQACKYLTETSLEPLYKGGALPALQELDLSYGTFCQSAIDELLACCTNLTHVSLNGCLNMHDLNWGCSCGQSKNLPAVNTLYRASSNENVPESSEQSPRLLQNLNCVGCPNIRKVVIPLRANCCHLLILNLSLSANLKEVDVTCLNLCFLNLSNCSSLEILKLECPRLTSLFLQSCNVDEEAVEVAISKCTILETLDVRFCPKISSMSMGRLRTICSSLKRIFSSSSTLLP* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0841 903 Pfam F-box-like 107 147 IPR001810 GO:0005515
Pvu9g0841 903 SUPERFAMILY L domain-like 584 897 - -
Pvu9g0841 903 SMART LRR_CC_2 665 690 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 395 420 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 528 553 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 458 482 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 862 893 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 837 860 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 617 642 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 591 616 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 349 374 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 276 301 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 486 516 IPR006553 -
Pvu9g0841 903 SMART LRR_CC_2 302 327 IPR006553 -
Pvu9g0841 903 PANTHER OS10G0396666 PROTEIN 20 862 - -
Pvu9g0841 903 Gene3D Ribonuclease Inhibitor 556 656 IPR032675 -
Pvu9g0841 903 SUPERFAMILY L domain-like 140 470 - -
Pvu9g0841 903 Gene3D Ribonuclease Inhibitor 828 901 IPR032675 -
Pvu9g0841 903 SUPERFAMILY RNI-like 286 684 - -
Pvu9g0841 903 MobiDBLite consensus disorder prediction 1 23 - -
Pvu9g0841 903 SMART fbox_2 105 145 IPR001810 GO:0005515
Pvu9g0841 903 ProSiteProfiles F-box domain profile. 99 145 IPR001810 GO:0005515
Pvu9g0841 903 SUPERFAMILY F-box domain 104 158 IPR036047 GO:0005515
Pvu9g0841 903 PANTHER OS10G0396666 PROTEIN 20 862 IPR044703 GO:0010252|GO:1905393
Pvu9g0841 903 Gene3D Ribonuclease Inhibitor 657 754 IPR032675 -
Pvu9g0841 903 Gene3D Ribonuclease Inhibitor 98 346 IPR032675 -
Pvu9g0841 903 Gene3D Ribonuclease Inhibitor 347 516 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0841 Pvu-Chr9 13096643 13102706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0841 - - gmx:100786178 1559.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0841 9 13096643 13102706 Pvu9g0841 9 13096643 13102706 ECH