Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0840 ATGCTAGCTTATTTGGAACACTTCGTTCACGAAAAAGATGCTGAATCGAGGCAAGACGACGAAGTTGCCAGCCTCTCCAGGGCGCTTGAACTTCAAGCCAGTATCGACGAATTGGGTCCAGCCGGAATCGCTAGTAAGGATTTCGGCGGCATAAAGTCCGTCAAACCCTTGGCCATGATCAGGCCTTCCTCGGCCGTTGATGTGGCCAGAGTGGTGAAAGCCGTGGCGGCGTCTCCGAGTCTGACGGTGGCGGCGCGGGGGAACGGGCACTCGGTGAACGGGCAGGCCATGGCGGAGAAGGGACTGGTCCTCGACATGCGTGCCTTGGAGGAGCCTTTTGAGATTCTCTGGATAGAAGGCACGGCCTACTTGGAAGTTTCGGGAGGGGCATTATGGGAAGACGTTCTTAAACGCTGCGTTTCGGAGGTTGGACTGGCCCCGAGGTCGTGGACGGATTATCTCGGTTTAACAGTTGGTGGAACGCTGTCCTACGCAGGCGTCAGCGGCCAAACCTTCCGTTACGGTCCTCAGACATCCAACGTAACGGAATTGGAAGTTGTAACAGGCAAAGGCGAAACGCTGTGCTGCTCCCTGACACAAAACTCTGAACTTTTCTTTGGTGCGCTCGGTGGCTTAGGACAGTTCGGTATTATTACAAGGGCCAGGGTGGTTCTCCAACAGGCTCCAGAAATGGTGAGGTGGATAAGAGTGGTTTACTCTGAATTTGAGGAGTATGCTGGCGATGCAGAGTTGCTGGTGGAGGAAGTAGAGGAATGTTTTGATTACGTGGAAGGGTTCGTTCTGGTGAACAGTGATGACCCGGCCAATGGATGGCCCACCGTGCCATTGGAACCGGAACAGGTGTTCGACCCGGTTCATATTCCTTCCACTGCTGGCCCTGTTTTGTATTGCTTGGAGCTGGGTCTTCACTATGGTAACGCGGATCATCCTTACCGTTCCCGTGTTGATATGGATGTGGATCGATTGCTCGGACGGCTGCGATTCATTCAGGGTCTCAAGTTCCAGACGGATGTGACCTACACAGAGTTTTTGCTACGTGTAAAGCGTGTGGAGGAGGACGCAAAAGCCAGCGGCACCTGGGATGCACCTCACCCTTGGCTCAACCTCTTTGTATCCAAGTCCAACATTGTTGATTTTGATCGTGAGGTGTTCAAGAAGATTCTCAAGGACGGGGTCGATGGCCCCATTTTAGTCTACCCTCTCTTGCGAACCAAGTGGGATAATCGTCACTCAGTGGTGGTGCCTGACAGTGACATCTTCTACATAGTAGCGTTGCTCCGATTCAGCCCACCACCTCCAAAGGGTCCACCAGCTGAACTCTTGGTGGCGCAAAATAATGAGATTATTCAATTCTGCACAAGCAGAGGCCTTGATTTCAAGCTATACTTTCCCAATTACCAGTCACGGGAGGATTGGATGAAACACTTTGGGAAACAATGGAGCAGATTTGTGGAACGAAAGGCCAGTTTTGATCCCATGGCTATCCTTGCACCAGGACAGAGAATTTTCTCCAGAACCTCTCAACCTCCTTCTATCCCATAA 1563 0.5208 MLAYLEHFVHEKDAESRQDDEVASLSRALELQASIDELGPAGIASKDFGGIKSVKPLAMIRPSSAVDVARVVKAVAASPSLTVAARGNGHSVNGQAMAEKGLVLDMRALEEPFEILWIEGTAYLEVSGGALWEDVLKRCVSEVGLAPRSWTDYLGLTVGGTLSYAGVSGQTFRYGPQTSNVTELEVVTGKGETLCCSLTQNSELFFGALGGLGQFGIITRARVVLQQAPEMVRWIRVVYSEFEEYAGDAELLVEEVEECFDYVEGFVLVNSDDPANGWPTVPLEPEQVFDPVHIPSTAGPVLYCLELGLHYGNADHPYRSRVDMDVDRLLGRLRFIQGLKFQTDVTYTEFLLRVKRVEEDAKASGTWDAPHPWLNLFVSKSNIVDFDREVFKKILKDGVDGPILVYPLLRTKWDNRHSVVVPDSDIFYIVALLRFSPPPPKGPPAELLVAQNNEIIQFCTSRGLDFKLYFPNYQSREDWMKHFGKQWSRFVERKASFDPMAILAPGQRIFSRTSQPPSIP* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0840 520 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 229 510 IPR015345 GO:0009690|GO:0019139|GO:0050660
Pvu9g0840 520 Pfam FAD binding domain 56 196 IPR006094 GO:0050660
Pvu9g0840 520 PANTHER CYTOKININ DEHYDROGENASE 7 13 515 - -
Pvu9g0840 520 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 510 IPR016164 GO:0003824|GO:0050660
Pvu9g0840 520 Gene3D - 106 230 IPR016169 -
Pvu9g0840 520 Gene3D - 232 469 IPR016170 -
Pvu9g0840 520 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 228 IPR016166 GO:0071949
Pvu9g0840 520 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 225 IPR036318 GO:0050660
Pvu9g0840 520 Gene3D - 44 511 IPR016167 -
Pvu9g0840 520 PANTHER GULONOLACTONE OXIDASE 13 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0840 Pvu-Chr9 13074754 13078870 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0840 K00279 - gmx:100795849 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0840 9 13074754 13078870 Pvu9g0840 9 13074754 13078870 ECH