Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0829 ATGTCTCAAGTCTTCAGCTTTTCAGGAAATGATGATTTTTGTCCTGGGGGTCGTATATATCCTAACCCCAAGGAACCATGTCTCTTTTTGTCTCTTGGCCGTTCAGTTGATTACTTTTCTCTTCAGAAGAGATCTCGCGTCAGTGTTTCATTTGATATCAATCGAGAATGGTTTGATGAGCAGAAGCAGGAGATATCTATTGAATCTTTGCCAGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGCTGGCCAAGATAGGAGTGTCTGTGCTTCTGTATCCAAGCGCTGGCTTATGCTTTTAAGCAGTATTTGTAAGAATGAAATATGCAGCAATGGAAGTACAGGAGATTATAATGTGGGTGGTGATGATGATCAGGGATTTAGCAACGAAGGATATCTTCTATCCCGAAGCTTGGAGGGAAAGAAGGCAACAGATGTTAGACTTGCTGCCATTGCTGTTGGAACAGCCTCTCGAGGAGGTCTGGGGAAGCTTACTATTCGTGGATGCAATTCAGGTCGTGGGGTGACTAACGTAGGTCTCAAGGCCATTGCTCATGGATGCCCTTCTCTAAAGGTTTTCTCTGTGTTTGATGTTGCTACTATTGATGATGAAGGCCTAATTGAGATTGCTAGCGGGTGTCGTAAGTTAGAGAAGCTTGACCTTTGCAAGTGTCCCAATATTTCTGACAAGACTTTAATTGCAGTCTCGAAGAAGTGTCCAAATCTGGGTGAGTTGTCAATTGAGTCATGTCCCAACATTGGTAACATAGGTCTACAAGCTATTGGGAAGTTGGGTCCCAATCTAAGGTCTATATCGATCAAGGGTTGCTCCGGAGTTGGTGATCAGGGAGTTTGTGGCCTTTTGACTTCAACTTCTTATGTTCTATCAAAGATGAAGCTTGAGTCGTTGATGGTGTCTGATCTCTCTCTAGCAACGATTGGGCATTATGGCTTTCAAGTTACCGATCTTGTCCTAAGTTGCCTCCCAAATGTCAGCGAGAAAGGGTTCTGGGTTATGGGTAATAGCCGTGGACTGCAGAAACTGAATTCAATCACAATCGAAGGCTGCCAAGGATTGACAGACACAGGGATCGAAGCTATTGGAAAGGGTTGTCCAAATGTGAAAAACTTCCAGCTTCGTAAGTGTGCATTTCTGTCAGACAAGGGGTTGGTTTCATTTACCAGGGCTTCTCTATCAATTGAGAGCCTACAATTGCAAGAATGCCACAGAATTACCCAAATTGGGCTTTTTGGCGTCTTTTTTCACTGTGCTGCCAAACTGAAGGTTCTTACTCTGATTAGCTGCTATGGGATCAAAGATCTGAACGCTGATTTGCCAGCAATGTCTCCTTGTGAATCATTTTGGTCTTTAACAATCCGTGACTGCCCTGGATTTGGCGATGCTAATCTTGCTTTACTTGGAAAACTGTGTCCTCAGCTTAGGCATGTTGAATTGAGTGGACTTCAGAGAGTAACAGACGCAGGGTTTCTTCCACTGCTGGAGTGTTCTGAAACTGGTCTGACAACAGTTAATCTAAGGGGATGTATAAATGTGACGGACAAAGTAGTTTTGCCTATTGTGAATTCACATGGATGTACTCGTCAGGTGCTATGCCTTGATGGTTGTACAAGAGTCACCGATGCTAGCACGATGGCAATTGCAGGCAATTGTCCGATGCTGTCTGATCTTGATGTTTCCAAGTGTGCAATCACTGATACCGGTATTGCAGCTCTTGCAGCTTGGAGATACTTTCTTTGGCAGGATGTATATCGGTTTCAGACAAGAGCATGCCTGCATTGA 1806 0.4402 MSQVFSFSGNDDFCPGGRIYPNPKEPCLFLSLGRSVDYFSLQKRSRVSVSFDINREWFDEQKQEISIESLPDECLFEILRRLPAGQDRSVCASVSKRWLMLLSSICKNEICSNGSTGDYNVGGDDDQGFSNEGYLLSRSLEGKKATDVRLAAIAVGTASRGGLGKLTIRGCNSGRGVTNVGLKAIAHGCPSLKVFSVFDVATIDDEGLIEIASGCRKLEKLDLCKCPNISDKTLIAVSKKCPNLGELSIESCPNIGNIGLQAIGKLGPNLRSISIKGCSGVGDQGVCGLLTSTSYVLSKMKLESLMVSDLSLATIGHYGFQVTDLVLSCLPNVSEKGFWVMGNSRGLQKLNSITIEGCQGLTDTGIEAIGKGCPNVKNFQLRKCAFLSDKGLVSFTRASLSIESLQLQECHRITQIGLFGVFFHCAAKLKVLTLISCYGIKDLNADLPAMSPCESFWSLTIRDCPGFGDANLALLGKLCPQLRHVELSGLQRVTDAGFLPLLECSETGLTTVNLRGCINVTDKVVLPIVNSHGCTRQVLCLDGCTRVTDASTMAIAGNCPMLSDLDVSKCAITDTGIAALAAWRYFLWQDVYRFQTRACLH* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0829 601 Gene3D Ribonuclease Inhibitor 345 450 IPR032675 -
Pvu9g0829 601 SUPERFAMILY F-box domain 60 108 IPR036047 GO:0005515
Pvu9g0829 601 SUPERFAMILY RNI-like 164 585 - -
Pvu9g0829 601 PANTHER UNCHARACTERIZED 16 586 - -
Pvu9g0829 601 Gene3D Ribonuclease Inhibitor 451 585 IPR032675 -
Pvu9g0829 601 SMART fbox_2 70 111 IPR001810 GO:0005515
Pvu9g0829 601 SMART LRR_CC_2 534 558 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 189 214 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 506 531 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 479 504 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 267 292 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 241 266 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 347 372 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 399 424 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 559 583 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 215 240 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 373 398 IPR006553 -
Pvu9g0829 601 SMART LRR_CC_2 453 478 IPR006553 -
Pvu9g0829 601 Pfam F-box domain 68 106 IPR001810 GO:0005515
Pvu9g0829 601 Gene3D - 59 109 - -
Pvu9g0829 601 Gene3D Ribonuclease Inhibitor 139 329 IPR032675 -
Pvu9g0829 601 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 16 586 - -
Pvu9g0829 601 Pfam Leucine Rich repeat 558 581 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0829 Pvu-Chr9 12965120 12968450 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0829 K14515 - gmx:100805418 930.243