Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0823 ATGCAGAGACCCAAAACAAAACGCCGCAATTCTTTTCCTCCGGAGCTTGCCAAAACCCCTAAACCCCTGGGAATGAAGAAGGCGAAGAAAAGTGTTGAAGAAAATGGGGGAAAGCTCAGGGGTGCGGACAGGTCAGCGTATTTCGCACGCAGAGAGGCAGCGAAGATTCTGAGAGTGGTTCTGGAAGGAGACGCTAAGCGCCGCGCTTCTGCCTCCATCAAATCCCTCATCTATCAACCTTCTGTTAGGAACAAGAAAGCCACCTTCGCTCTCCTTTGTGAAACCCTAAAACATCTTCCCATCATCAAGGATGTCTTGGAAGCTGCTTCCATTCTCAACACCAAGTGGAAGAGGCAACAAGAACTGGTTTATATCATTGTCTATGATATCCTTTTCGGCCAGGCGGTTCCACTAGTTGGTGATGCAGAGAAGTACCTTATGCGCCACGAAGGGGCCCTGCGTTCAGCTCTTAAACAACTTTTGTCGCAGAGAAATGTGAAGACTGTTAAACAGTTGATTGCTCTGCATGAAGTTCCAGATGTTTCGGTACCTCGGTATGTTCGCGTGAATACGCTTAAACTGGACGTTGATTCTGCCTTGTTCGAACTTCAGAAAAATTACTCGGTTCAAAAGGATAATCTACTGCCTGAATTACTGATACTCCCACCAGGCACTGATTTACACGATCATCCTCTTGTAAAAAATGGCAGTATCTTTATGCAAGGTAAGGCAAGTTCCATGGCAGCACCAGCTCTTAGACCTCAACCAGGATGGGAGGTTATTGATGCATGTGCAGCACCGGGAAACAAAACTATTCACCTTGCTGCCCTTATGATGAGTAGGGGAAAGATTATAGCATGTGAGCTGAAAAAAGAAAGGGTTAAGCGTTTGAAAGACACTATAAAGCTATCTGGTGCTTCTAACATACAAGTCCTGAATGAGGATTTCTTGAACATAAATCCCAAGGATCCTTCATATTCTAAGGTGAATGCTATTCTCTTGGATCCTTCCTGCTCTGGTTCTGGTACTGCTGCCTCAAGACTAGACCATCTGCTACCATCTAGAACAGCAGGTCAGGATACTGATATGGAAAGATTGAATAAGCTTGCAAGTTTCCAGAGAAAGGCTCTTCAGCATGCTTTACTTTTTCCAGCTCTTGAAAGAATTGTCTACAGCACATGTTCAATAAACCAAATTGAGAACGAAGATGTCATCAAATCTGTTCTTCCCATTGCCGAATCACATGGATTTCACTTGGCCAAGCCCTTCCCCGAGTGGCAATGCCGTGGTCTTCCAGTGTTTGAAGGCTCTGAATGCCTGATTCGGACAGATCCTGCTAAGCATGGTGAGGGTTTCTTCATTGCTTTGTTTGCTAGGAAAGATGCGATCTCTTCGGAGAGTTCAAATAAGAATAAAACTACAATTTTGCACAGCACTCCCGGAATTAAAGACGAGCAAAGAAAGAAGAAACGCATACCGTTTATTAGCACTAACCCATTCAAAATGTGGTTGTATGATCAATTGATGTAG 1530 0.4438 MQRPKTKRRNSFPPELAKTPKPLGMKKAKKSVEENGGKLRGADRSAYFARREAAKILRVVLEGDAKRRASASIKSLIYQPSVRNKKATFALLCETLKHLPIIKDVLEAASILNTKWKRQQELVYIIVYDILFGQAVPLVGDAEKYLMRHEGALRSALKQLLSQRNVKTVKQLIALHEVPDVSVPRYVRVNTLKLDVDSALFELQKNYSVQKDNLLPELLILPPGTDLHDHPLVKNGSIFMQGKASSMAAPALRPQPGWEVIDACAAPGNKTIHLAALMMSRGKIIACELKKERVKRLKDTIKLSGASNIQVLNEDFLNINPKDPSYSKVNAILLDPSCSGSGTAASRLDHLLPSRTAGQDTDMERLNKLASFQRKALQHALLFPALERIVYSTCSINQIENEDVIKSVLPIAESHGFHLAKPFPEWQCRGLPVFEGSECLIRTDPAKHGEGFFIALFARKDAISSESSNKNKTTILHSTPGIKDEQRKKKRIPFISTNPFKMWLYDQLM* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0823 509 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 184 459 IPR029063 -
Pvu9g0823 509 MobiDBLite consensus disorder prediction 1 36 - -
Pvu9g0823 509 Gene3D Vaccinia Virus protein VP39 241 466 IPR029063 -
Pvu9g0823 509 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 175 460 IPR001678 GO:0008168
Pvu9g0823 509 PRINTS RNA (C5-cytosine) methyltransferase signature 232 246 IPR023267 GO:0001510
Pvu9g0823 509 PRINTS RNA (C5-cytosine) methyltransferase signature 261 271 IPR023267 GO:0001510
Pvu9g0823 509 PRINTS RNA (C5-cytosine) methyltransferase signature 330 342 IPR023267 GO:0001510
Pvu9g0823 509 PRINTS RNA (C5-cytosine) methyltransferase signature 386 402 IPR023267 GO:0001510
Pvu9g0823 509 PRINTS RNA (C5-cytosine) methyltransferase signature 442 459 IPR023267 GO:0001510
Pvu9g0823 509 CDD AdoMet_MTases 260 348 - -
Pvu9g0823 509 Gene3D Sun protein; domain 3 176 240 - -
Pvu9g0823 509 Pfam 16S rRNA methyltransferase RsmB/F 251 457 IPR001678 GO:0008168
Pvu9g0823 509 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 37 465 IPR023267 GO:0001510
Pvu9g0823 509 PANTHER BNAA09G04380D PROTEIN 37 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0823 Pvu-Chr9 12915505 12920902 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0823 K15264 - gmx:100775620 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0823 9 12915505 12920902 Pvu9g0823 9 12915505 12920902 ECH