Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0807 ATGGATTCTTCACAAGGATCTACCATTGCTGGTTTCGTGGACAATGCATCCATCCAGAGGAAACAGTCTAGTTTTGATGGCGTTCCTGTGTATGTCAAGGAGCTAATTGCCGGAGGCTTTGCTGGTGCGCTTTCTAAGACCACTGTTGCACCTCTCGAACGAGTCAAGATTCTTTGGCAGACAAGGACACCAGGATTTCATTCTCTTGGGGTGTATCAATCTTTGAATAAATTACTAAAGGCTGAAGGTTTTCAAGGATTCTATAAGGGAAATGGAGCTGGTGTTATCCGCATTGTTCCATATGCAGCCTTGCATTTTATGACATATGAGCGCTACAAAAGTTGGATCTTGAATAATTATCCAGCGTTAGGTTCGGGTCCTTTTATTGATCTTTTAGCAGGCTCTGCTGCTGGGGGAACATCAGTTTTATGTACCTACCCGTTGGATCTTGCCCGTACCAAACTTGCTTACCAGGTAGTGGACACAAGAGCAGGTATCAAAGATGGTATGAGAGGAGTTCAACCTGCACATAATGACATTAAAGGTGTGCTTACGAGTGTCTATAAGGAGGGCGGAGTTCGTGGGCTTTATAGGGGTGCAGGACCGACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTATGAGAAATTGAAGACACAGCTTCCTGAAGAACATCAAAACTCCATTATGATGCGTCTTTCTTGTGGAGCTCTAGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTAGATGTTGTCAAGAGACAGATGCAGGTTGGCGGCCTGCAGAATGCTACACATGAGAATGTCAGATATAAAAATACCATTGATGGACTTAGGACGATTGTTCGTAATCAAGGATGGAGGCAGCTGTTTCATGGCGTAAGCATTAACTATATAAGGATTGTTCCTTCCGCTGCAATTAGTTTCACCACATACGACATGATGAAGTCTTGGCTTGGCATACCGCCTCAACAAAAGTCTCGATCAGTTTCGGCAGCATGA 1017 0.4385 MDSSQGSTIAGFVDNASIQRKQSSFDGVPVYVKELIAGGFAGALSKTTVAPLERVKILWQTRTPGFHSLGVYQSLNKLLKAEGFQGFYKGNGAGVIRIVPYAALHFMTYERYKSWILNNYPALGSGPFIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTRAGIKDGMRGVQPAHNDIKGVLTSVYKEGGVRGLYRGAGPTLTGILPYAGLKFYMYEKLKTQLPEEHQNSIMMRLSCGALAGLFGQTLTYPLDVVKRQMQVGGLQNATHENVRYKNTIDGLRTIVRNQGWRQLFHGVSINYIRIVPSAAISFTTYDMMKSWLGIPPQQKSRSVSAA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0807 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 323 IPR018108 -
Pvu9g0807 338 Pfam Mitochondrial carrier protein 31 119 IPR018108 -
Pvu9g0807 338 Pfam Mitochondrial carrier protein 127 226 IPR018108 -
Pvu9g0807 338 Pfam Mitochondrial carrier protein 232 324 IPR018108 -
Pvu9g0807 338 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Pvu9g0807 338 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Pvu9g0807 338 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Pvu9g0807 338 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Pvu9g0807 338 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Pvu9g0807 338 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Pvu9g0807 338 Gene3D Mitochondrial carrier domain 29 325 IPR023395 -
Pvu9g0807 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 115 IPR018108 -
Pvu9g0807 338 SUPERFAMILY Mitochondrial carrier 32 319 IPR023395 -
Pvu9g0807 338 PANTHER SOLUTE CARRIER FAMILY 25 13 332 - -
Pvu9g0807 338 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 13 332 - -
Pvu9g0807 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 224 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0807 Pvu-Chr9 12778701 12786406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0807 107 333 Organic Solute Cotransporters AT1G14560 69.264 8.80e-114 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0807 - - gmx:100800243 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0807 9 12778701 12786406 Pvu9g0807 9 12778701 12786406 ECH