Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0789 ATGGCGGAGGAAGCGCAGTATTCATCGGGAACCGAGTCGGCATCCCTCAAGCGCAAGTACGAAGACCAACCCTCCGACAGACCCACCGGATTCTCAGCGGGCCCTGCTACCGGCATCGAGCTCGCCAAGCAGCGTGCTCAAGAAGTCGCCGCTCGCCTCCTCAGCGTTACTCCTCCTCCCCCGCTCGATGCTAAGCGTCCCAAACCCGATAACGGTGCTCCTACCTCTGGCTTCGATTCTTACGATGCGAAGCCTCAGTACTCGGCCATTCCTCCCGTTTCCTACAGTCAACAAGGAACGAGTAAGAAGATTGATATCCCTAACGGCAGGGTTGGTGTGATTATTGGCAAAGCTGGAGAGACCATTAAGTATCTCCAGTTGCAGTCTGGTGCCAAAATTCAAGTTACTCGTGATATGGACGCGGACCCTAATTCCACTACTAGGACGGTTGAGCTTATGGGCACTCCCGAGGCAATTGCCTCTGCTGAGAAACTCATCAATGAAGTTCTTGCTGAGGCTGAATCTGGGGGTTCTGGCATTGTTGCTCGGAGACTGACTGGACAAGCTGGGTCCGATGAATTTGTCATGAAAATCCCAAATAATAAGGTTGGTCTTATAATTGGTAAAGGAGGAGAAACTATAAAGAATATGCAAGCTTCTACTGGTGCACGGATTCAGGTGATACCACTTCATCTTCCCCCAGGTGACACATCAACTGAAAGAACATTAAAAATTGATGGGACTTCTGAGCAAATTGAGTCTGCAAAGCAGTTGGTTAATCAAGTCATCAGTGGTGAGAATCGTGTTAGAAATCCTTCAATGTCTGGTGGATATCCTCAGCAAGGCTACCAATCTCGACCACCCTCGAACTGGGCTCCCCCTGCTCAAATGCAGCAACCTGGTTATGGCTATATGCAACCTGGAGCATATTCTGGTCCATCACCTCAGTATAATATGCCTCAACCACCTTATGCAGGCTATCCTCCTCAACAACCAGGTGGATATTCCACCAGCTGGGACCAGTCTTCTGCACCACCTCACCAACAGTCTACTCAAGCTGGTGGCTATGATTACTATAGTCAACAGCCACAGCAACCGCAAAATCCTGGAGGCCCTGCACCTCCAGCGGATGGCTCTGCTTACAGTTACAGTCAACCACCTTCTTTTGGTTATAGCCAACCCGGACAGGGTTATGCTCAGGACAGCTATAATGCATACAATGCACAATCTCAATCAGGGTATGGACAGCCACCAGCATATGATCAGCAGCAAGGCTATGGGTCAGCTACTACCGGCTATGGTAGTGGGAATAACTCAGCACCAGATGGCCACACTGCAAGTTATGCATCTCAGGGAGATTCAGCCCAAGCTCCATCTACCCAACAGCCACAGCAAGGTTATCCTACCAGCCAACAGCCCAGCTCAAACACTGCCAGCTACCCACCTCAGGGAACTCCTCAGTCAGGTTATGGGGTTCCCCCTACATCCCAAGCTGCTTATGGAAGTCAACCACAGCCAGGTTATGGAGCCCCTCAATCTCAAAAGCCAAGTGCTAATCCTCCTGTTTATGGACAGTCACAGTCACCTAGTGCGGTAGGAGGCTATGGTCAGTCAGCATATCCTGCGCAGCCTCCACCATCTGGTTATTCTCAACCCCAACCAGAATCTGGTGCTCAGAGAGCACCACCTTCGGGATATGGTGCAGGGCAACCAGGGTATGGTTCTCAAACATATGGTGCACCTCAGGGTGGCCAGCCTACTTATGGTCAGGCACCGCCTCCATACAGCAGTAGTTCTTATGGTGCTGGTTATACTCAGGCTCCAGCATATACTGCCGATGGTAATGCCAGTGGGAACACTCAGCCTCAGACTGCCGTTGCTAAAGCATCGCCTCAGAGTTGA 1902 0.51 MAEEAQYSSGTESASLKRKYEDQPSDRPTGFSAGPATGIELAKQRAQEVAARLLSVTPPPPLDAKRPKPDNGAPTSGFDSYDAKPQYSAIPPVSYSQQGTSKKIDIPNGRVGVIIGKAGETIKYLQLQSGAKIQVTRDMDADPNSTTRTVELMGTPEAIASAEKLINEVLAEAESGGSGIVARRLTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIDGTSEQIESAKQLVNQVISGENRVRNPSMSGGYPQQGYQSRPPSNWAPPAQMQQPGYGYMQPGAYSGPSPQYNMPQPPYAGYPPQQPGGYSTSWDQSSAPPHQQSTQAGGYDYYSQQPQQPQNPGGPAPPADGSAYSYSQPPSFGYSQPGQGYAQDSYNAYNAQSQSGYGQPPAYDQQQGYGSATTGYGSGNNSAPDGHTASYASQGDSAQAPSTQQPQQGYPTSQQPSSNTASYPPQGTPQSGYGVPPTSQAAYGSQPQPGYGAPQSQKPSANPPVYGQSQSPSAVGGYGQSAYPAQPPPSGYSQPQPESGAQRAPPSGYGAGQPGYGSQTYGAPQGGQPTYGQAPPPYSSSSYGAGYTQAPAYTADGNASGNTQPQTAVAKASPQS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0789 633 MobiDBLite consensus disorder prediction 575 633 - -
Pvu9g0789 633 ProSiteProfiles Type-1 KH domain profile. 99 166 - -
Pvu9g0789 633 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 101 177 IPR036612 GO:0003723
Pvu9g0789 633 MobiDBLite consensus disorder prediction 268 633 - -
Pvu9g0789 633 MobiDBLite consensus disorder prediction 381 534 - -
Pvu9g0789 633 MobiDBLite consensus disorder prediction 1 101 - -
Pvu9g0789 633 CDD KH-I 193 259 - -
Pvu9g0789 633 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 50 621 - -
Pvu9g0789 633 ProSiteProfiles Type-1 KH domain profile. 191 259 - -
Pvu9g0789 633 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 194 266 IPR036612 GO:0003723
Pvu9g0789 633 CDD KH-I 101 166 - -
Pvu9g0789 633 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 50 621 - -
Pvu9g0789 633 Gene3D K Homology domain, type 1 187 289 IPR036612 GO:0003723
Pvu9g0789 633 Gene3D K Homology domain, type 1 94 186 IPR036612 GO:0003723
Pvu9g0789 633 MobiDBLite consensus disorder prediction 331 366 - -
Pvu9g0789 633 Pfam KH domain 195 260 IPR004088 GO:0003723
Pvu9g0789 633 Pfam KH domain 103 168 IPR004088 GO:0003723
Pvu9g0789 633 SMART kh_6 98 171 IPR004087 GO:0003676
Pvu9g0789 633 SMART kh_6 190 264 IPR004087 GO:0003676
Pvu9g0789 633 MobiDBLite consensus disorder prediction 268 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0789 Pvu-Chr9 12581006 12586512 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0789 K13210 - gmx:100797476 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0789 9 12581006 12586512 Pvu9g0789 9 12581006 12586512 ECH