Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0737 ATGCATACGCATGTGTGGAAGCAGATCAGAGACAGAGAAGGTGGGAGAGTGCATGCGAACCATTTCGCCAATAGCATAAAATCCTATCGCACTTCGCAGCTCCAATTAGCGAATCACAAAGACATCGTGTCCCCTCACAAGGGCGCTATCAACTCCCTTCAGATTGATTCGACAGAGGGAAGGTATCTGCTCTCCGCCGCCTCCGATGCCTCGGTAGCCGTCTACGACGTTCAACGATCCGCCTCCGCCGCTTCCGAAGCAGCGGCCGCCTTCTCCAAACACAGGTGCTTATTTGTCGTTGACAAGCAGCACCGACAGGCCCACAAATATGCCGTCTCCACAGCCATATGGTATCCCATTGACACCGGTTTGTTCGTCACTGGCTCATACGATCACCACATTAATGTTTGGGATACCAATACCACCCAGGTGGTGGTGAACTTCAAAATGCCGGGAAAGGTGCATAGGACTGCAATGTCCAATTTGTCAACTTCTCACATGCTTATCGCTGCTGGCACTGAGGATGTCCAAGTTCGCCTCTGTGATATTGCTTCCGGGGCTTTTGCTCACACTTTGTCCGGTCACCGTGATGGTGTAATGACTGTTGAATGGTCTAATTCAAGTGAATGGGTATTGGTTACCGGGGGATGTGATGGTGCAATACGATTTTGGGACATCAGGCGTGCTGGCTGTTTCCAAGTTTTAGATCAATCTCAGACTCAGTTTGGAAGGCGCCCACCTATACTCAAACGGTCCACGATAACTAAGGATTCAAGTACAAAAATGCGAGGTGCCCAAAAGAAACATGCTAATGGAAGTGGTAGCAGACAACATCCAATTGGCAGAGTTCCATCCAAGGGACCAATGAAGCAGAGGTTACATCCTGGAATGCTGTCTACCCAGGATCGGGCGACTGCTCATTATGGTGCTGTGACAGGGTTAAAGGCAACAGAGGATGGCATGTATCTACTAAGTGCAGGGTCTGATTCAAGATTAAGGTTGTGGGATGTTCAATCTGGTTGCGACACACTTGTGAACTTTGAAACAGTTCGTCTGCAAATAAATAAACCTCTTCAATTAGCCACCACTCAAGATTCAACCCTTGTTTTTGTTCCGTGCATGAGATCTGTGAAAGCATTTGACATGTGGTCTGGGAACACCTACACAATATTACGTGGCCACTATGAATGTGTGAACTGTTGCTGGTTTAATCAACAAGATCAGGAACTGTACACTGGTGGAAATGATAGACAAATTCTAATCTGGTCACCTGCTAGATCAATTGATGGTGAAGGACCTGCTGAGGATCAGGATAGCTGGAGTAGTTGA 1329 0.4771 MHTHVWKQIRDREGGRVHANHFANSIKSYRTSQLQLANHKDIVSPHKGAINSLQIDSTEGRYLLSAASDASVAVYDVQRSASAASEAAAAFSKHRCLFVVDKQHRQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSQTQFGRRPPILKRSTITKDSSTKMRGAQKKHANGSGSRQHPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCDTLVNFETVRLQINKPLQLATTQDSTLVFVPCMRSVKAFDMWSGNTYTILRGHYECVNCCWFNQQDQELYTGGNDRQILIWSPARSIDGEGPAEDQDSWSS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 304 345 IPR001680 GO:0005515
Pvu9g0737 442 Gene3D - 6 426 IPR015943 GO:0005515
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 192 234 IPR001680 GO:0005515
Pvu9g0737 442 ProSitePatterns Trp-Asp (WD) repeats signature. 212 226 IPR019775 -
Pvu9g0737 442 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-8 6 442 IPR042238 GO:0006283
Pvu9g0737 442 ProSitePatterns Trp-Asp (WD) repeats signature. 323 337 IPR019775 -
Pvu9g0737 442 Pfam WD domain, G-beta repeat 388 423 IPR001680 GO:0005515
Pvu9g0737 442 Pfam WD domain, G-beta repeat 190 225 IPR001680 GO:0005515
Pvu9g0737 442 Pfam WD domain, G-beta repeat 305 336 IPR001680 GO:0005515
Pvu9g0737 442 Pfam WD domain, G-beta repeat 107 138 IPR001680 GO:0005515
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 304 340 - -
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 192 227 - -
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 43 85 IPR001680 GO:0005515
Pvu9g0737 442 SMART WD40_4 294 336 IPR001680 GO:0005515
Pvu9g0737 442 SMART WD40_4 36 76 IPR001680 GO:0005515
Pvu9g0737 442 SMART WD40_4 185 225 IPR001680 GO:0005515
Pvu9g0737 442 SMART WD40_4 93 138 IPR001680 GO:0005515
Pvu9g0737 442 SMART WD40_4 384 423 IPR001680 GO:0005515
Pvu9g0737 442 SUPERFAMILY WD40 repeat-like 43 425 IPR036322 GO:0005515
Pvu9g0737 442 PRINTS G protein beta WD-40 repeat signature 125 139 IPR020472 -
Pvu9g0737 442 PRINTS G protein beta WD-40 repeat signature 212 226 IPR020472 -
Pvu9g0737 442 PRINTS G protein beta WD-40 repeat signature 323 337 IPR020472 -
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 391 423 - -
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 105 147 IPR001680 GO:0005515
Pvu9g0737 442 MobiDBLite consensus disorder prediction 250 294 - -
Pvu9g0737 442 ProSiteProfiles Trp-Asp (WD) repeats profile. 391 423 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0737 46 241 Miscellaneous Gene Families AT5G08390 20.918 1.34e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0737 K10570 - gmx:100815581 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0737 9 11991910 11996029 Pvu9g0737 9 11991910 11996029 ECH