Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0730 ATGTCGAATAGATCTGGTCAGGGTAGACAAGACAACAACAACAAGGGTTTCACCAAAACCCATTACCACAACAACTATGTCCCCAAAAATCCCAACCCAACCCTCTCAACCTCCCTCAGACAAACCCAACCGTCAATCCCCGCCACCACTAGCGGAGCCCCAAACAGAGCCCAGAATGGAAATTTTGTTAAATACTTACCACAAGACGAGGCCGTGGCGGCGGGTCTTGGCGCCGAAGATGGAGCCTTGGATCCCCTCGAATCTCAGAGAGTCGTGGATCTTTTGAACACACACTTGTCGCGCTTGCTCAAGTGCAAACCCAAGCAATTCTGGACACAAGTGGCTGCTGACACCTCCTTACATGAGTTTTTGGACAGCTTCTTGCAATTCAGAAACAGGTGGTATGATTTCCCTCATCGCGGGGTGAAAGGGATTGTTGCAGGTGTTATTGTTGGGGAGCGCGATTTGAGTCGCCGCGTTTTCATGGTATTGTATCGCATTTCTTCGAATAAAGACCCCGGTGCTCGACCGGCCGATGCCCTCAGTTTGAGAGACCATGGAGTTCTTTTGCAGGAGAAAAAGTTGCTTGAATTGCCAAAGTTATTGGATATATGTGCCATATACTATCATGAAAATGAAGAACTGACAAGATCACTGGTCAGAAATGCCTTGAATGCTCAACCTTGGCTCCATAATAATCTGACTGCAGTAATATCCCATTTTCTAGGAATTGTCAGCACAATGCATGAACGTTGCAGCTCATCATTGGAGGTTTTATTTTCTTCTGGAAATCTCGATCACCACAATGCTGCTTTTCTCCAAGCTGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATTCTTTTGTTAGTTCATACGGACCAGCAGCTGTATTCTTTTCTTGTCCAGTTGAAATGAGTTATGGGAATGAGGAACTGATGAGCCTCCTTGCGAGATTGCATGATTCACTAATTCCATCATTGCAAAAGGGATTCCGTATGCTTTTTTCTGACAAACATGATGCCACATCATCTAATATCTTGGTTAGTCTGAAGATGTTAAAAATAAGATTGGTAAAGTTTGGTTGGCAACTATTGCACTTGTGCTATCTAAGTGATGAAGTGTTCAGAGATAGCTTCCCTCTTCCAGCTGCCACTAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCAGATATTCTGGTTCAAACATTTCGAGATATCAATTCTGTATCAGCCCATTCTCGGGAAAGCCATCAGAAGGAAACATTTCTTCAAGATGTTGAAAGAAATTTCAATATACTGAGTAGGATTGATAGATTAAAGGATAGTGGATGGATATTCATTGATGATGAACAGTTTCAATATCTATCGGGGATGATGAGTTCGGTGAAAGAGATTTATAAGGACCCATATTCTGCTACAGCCCCTGTGCCAAAACAATCATTACTGACGGATGAAGATGCTGCAATTGCAGAGTCAAACATCAGTCAAATTAGGGACCTGTTCCCTGATTACGGTAAAGGATATTTAGCTGCGTGTCTTGAGGTTTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATGAAGATCTGCAGAACCTGGACACCTCGCTAGAGACATTGCCACCGGCCAAGCCTACCACCGTGGGGAATGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGCATCCTCAAATCCAGAAGTTGTCAGGGGGAAGCAACAGACGGAGGGGTCATTGATGTCATCCACTGCTTCACTAGGAAAATTTATAAGGAAATCTAAAGCTGACTTGCCTGATGTCAGTATTCTGGATAAAAAGGACGAGAAAGATACCTCAAAAACTGCTGCTATGATTTTACAATATGAATATGAAGATGAATATGACGACTCTTTTGATGACTTGGGTTTAAGTGTAGCGGACTCTGGATTAGAAGAAAATGAGACACTTGGTGCCCAAATAAATTCAAAATCAGGGAAATCGTGGGCAACAGAGAGTGGAAACTCGGTAAAAGATGTCCCTGATTCAAAATGGGGCTCTAGGAAAAAACCACAGTACTATGTCAAAGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCAGTAGCAGTTGCAAATTCTGATGAAGCTTCACTAGTAACGCAAGCTCAGAAAGAGTTAATACATGGCCTTGGACGAGGCGGAAACCTTCCTCTTGGTGCAGTAAAGAAGTTGACAGATTCCAACAAGGAGGATGATAACCAATTCCAGGTTTCTGAAACGGAAGGCAGTGGGGTTCCGGGCAAATCTTTTGGTAGGGGTAGGAAGGAAGGTGGTGGAAGACAGATTGCTGCATCTCATCAGCAGCCTGTGCAACAATCTGATGATTCTGAGGTGGATGGGAATAACCAAATGGGTAGAGGAAGAGGTAGAGGGAGAGGGAGGGGCAGAGGAGGAGGAAGAAACAATCACCACCAGAAGGACCGATCCATGAAGAAGCACTTCTCTGGAGTGAGCGGTTTTTAA 2550 0.4365 MSNRSGQGRQDNNNKGFTKTHYHNNYVPKNPNPTLSTSLRQTQPSIPATTSGAPNRAQNGNFVKYLPQDEAVAAGLGAEDGALDPLESQRVVDLLNTHLSRLLKCKPKQFWTQVAADTSLHEFLDSFLQFRNRWYDFPHRGVKGIVAGVIVGERDLSRRVFMVLYRISSNKDPGARPADALSLRDHGVLLQEKKLLELPKLLDICAIYYHENEELTRSLVRNALNAQPWLHNNLTAVISHFLGIVSTMHERCSSSLEVLFSSGNLDHHNAAFLQADLLEVMDFINDAIVSMDSFVSSYGPAAVFFSCPVEMSYGNEELMSLLARLHDSLIPSLQKGFRMLFSDKHDATSSNILVSLKMLKIRLVKFGWQLLHLCYLSDEVFRDSFPLPAATKMFPANVEDPVIRADILVQTFRDINSVSAHSRESHQKETFLQDVERNFNILSRIDRLKDSGWIFIDDEQFQYLSGMMSSVKEIYKDPYSATAPVPKQSLLTDEDAAIAESNISQIRDLFPDYGKGYLAACLEVYDQNPEEVIQRILEGTLHEDLQNLDTSLETLPPAKPTTVGNDKGKGKLIDSTSASSNPEVVRGKQQTEGSLMSSTASLGKFIRKSKADLPDVSILDKKDEKDTSKTAAMILQYEYEDEYDDSFDDLGLSVADSGLEENETLGAQINSKSGKSWATESGNSVKDVPDSKWGSRKKPQYYVKDGKNYSYKVAGAVAVANSDEASLVTQAQKELIHGLGRGGNLPLGAVKKLTDSNKEDDNQFQVSETEGSGVPGKSFGRGRKEGGGRQIAASHQQPVQQSDDSEVDGNNQMGRGRGRGRGRGRGGGRNNHHQKDRSMKKHFSGVSGF* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0730 849 Gene3D - 499 541 - -
Pvu9g0730 849 MobiDBLite consensus disorder prediction 755 849 - -
Pvu9g0730 849 MobiDBLite consensus disorder prediction 670 688 - -
Pvu9g0730 849 CDD CUE_ASCC2 500 539 IPR041800 -
Pvu9g0730 849 Pfam CUE domain 500 540 IPR003892 GO:0043130
Pvu9g0730 849 MobiDBLite consensus disorder prediction 670 697 - -
Pvu9g0730 849 ProSiteProfiles CUE domain profile. 498 541 IPR003892 GO:0043130
Pvu9g0730 849 MobiDBLite consensus disorder prediction 572 593 - -
Pvu9g0730 849 MobiDBLite consensus disorder prediction 1 60 - -
Pvu9g0730 849 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 11 848 - -
Pvu9g0730 849 MobiDBLite consensus disorder prediction 818 839 - -
Pvu9g0730 849 SMART cue_7 498 540 IPR003892 GO:0043130
Pvu9g0730 849 SUPERFAMILY UBA-like 499 555 IPR009060 GO:0005515
Pvu9g0730 849 MobiDBLite consensus disorder prediction 793 809 - -
Pvu9g0730 849 MobiDBLite consensus disorder prediction 553 593 - -
Pvu9g0730 849 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 11 848 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0730 K18667 - gmx:100778129 1390.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0730 9 11878389 11884865 Pvu9g0730 9 11878389 11884865 ECH